Xenopus tropicalis (tropical clawed frog): 407888
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Entry
407888 CDS
T01011
Symbol
irx3
Name
(RefSeq) iroquois-class homeodomain protein irx-3
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
407888 (irx3)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
407888 (irx3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
407888
NCBI-ProteinID:
NP_001001216
Xenbase:
XB-GENE-480486
UniProt:
Q6NVN3
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Position
4:complement(41850541..41854287)
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AA seq
448 aa
AA seq
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MSFPQLGYQYIRPLYPSDRQNVGGTRSGTELSPAGTLSNVLSSVYGTPYAAAAAAQAYGA
FLPYSAELPIFPQLGSQYEMKDSPGVQHAAFSHPHAAFYPYGQYQFGDPSRPKNATREST
STLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRT
DEEGNAYGSDHEEDKHEDDEEIDLENIDTEDIESKEDLDDPDTDIHSDSKTDARSDSEAS
DGFEDLNAPEDRLLKSVVGQRQVLNEEPQDKCALSSDAKASQPACEQIKLDRIPSSPPLE
NNIPAAHKPKIWSLAETATTPDNPRRSPNTGGSVNTQNLIAQHRLIASPGSRFQGWTGRA
FSAQQLSLLNSAHFLQGLSVSHTALGSGTASFPKAAEPKHSTDSLTDRSSTVDIEKKIPV
LNTAFQPVQRRSQNQLDAAMILSALSSS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccacagctgggctaccagtacatcagacctctatacccctcggacaggcag
aacgtggggggcaccaggagcggaactgaactctctccggccgggactctttctaatgtt
ctctcctcggtgtacggaactccctacgctgcagccgccgcggcacaagcctatggagcc
ttcctgccctacagcgcggagctgcccatcttcccccagttgggctcacagtatgaaatg
aaggacagtccgggggtccagcatgccgccttctcccacccccacgcagccttttatccc
tacggacagtaccagtttggagatccgtcaaggcccaaaaacgctaccagagagagcaca
agtacccttaaggcctggctcaacgaacacagaaagaacccatatccgaccaagggcgag
aagatcatgcttgccatcatcactaaaatgaccctcacacaggtgtccacctggtttgct
aacgcaaggaggagacttaaaaaggagaacaaaatgacttgggcccccaggagccgaact
gatgaggaaggtaacgcttacggcagcgaccatgaagaagacaagcatgaggacgacgag
gagattgacctggagaacatcgacactgaggacattgagagtaaggaagacttggatgac
ccagacactgatatacactcggactctaaaactgatgccaggagtgactcggaagcctcg
gatgggtttgaggacctgaatgcccctgaggacagacttctcaagtcagtggttggtcaa
aggcaggtgttaaatgaggagccccaggacaagtgtgcactttcttctgatgctaaagct
tcccagcctgcgtgtgagcagatcaaactggacagaatcccctctagtcctcctctggag
aacaacattcccgcggcccacaaacccaaaatctggtcactggcagagacagcaacaacc
ccagataacccacgcaggtcccccaacacgggtggctcagtgaacactcaaaacctgatt
gcacaacacagacttatcgcctccccagggagcaggttccagggttggactggaagagca
ttctctgctcagcagttgtctttactaaactctgctcattttctgcaaggactgagcgtc
tctcacacagccctgggctctggcactgcaagtttccctaaggccgccgagcccaagcac
agcacagactctctaacagatcgatccagtacagtggacatagagaaaaaaatacctgta
ttaaatacagctttccaaccagtgcaacgaaggtcacaaaatcagctggacgctgccatg
atcctttccgctctatcctcatcctaa
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