Xenopus tropicalis (tropical clawed frog): 407890
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Entry
407890 CDS
T01011
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
407890 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
407890 (prpf31)
Spliceosome [BR:
xtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
407890 (prpf31)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF2357
Eno-Rase_FAD_bd
IMP2_N
Motif
Other DBs
NCBI-GeneID:
407890
NCBI-ProteinID:
NP_998859
Xenbase:
XB-GENE-489336
UniProt:
Q6NVP6
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Position
7:complement(104947030..104959074)
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AA seq
498 aa
AA seq
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MSLADELLADLEEAAEEEEENLIDEDDLETIEEVQEEMQVDLNAESVKSIAKLSDSKLFS
EILLKIDGYIKKQPKASEVMGPVEAAPEYKVIVDANNLTVEIENELNIIHKFIRDKYSKR
FPELESLVPNALDYIRTVKELGNNLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLTD
EELERIEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTAAKIMGIAGGLTNL
SKMPACNVMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLHRKAARLVSAKCTL
AARVDSFHESSEGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRK
MKERLGLTEIRKQANRMSFAEIEEDAYQEDLGFSLGHLGKSGSGRIRQAQVNEATKARIS
KTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFS
SMAEFLKVKSEKSGTMTQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggatgaattattggctgaccttgaggaggcagcagaagaagaagaggag
aacttgattgacgaagatgatttggagaccattgaagaggtgcaggaggagatgcaagtg
gacttaaatgcagaatcagtaaaaagcattgccaagctatcggatagtaaattgttttca
gaaatccttttaaagattgacggatacatcaaaaagcaaccaaaggcttctgaagtaatg
ggccctgttgaagctgctccagagtacaaagttatcgttgatgctaacaatctgactgtg
gagattgaaaatgagctaaatatcattcacaaatttattcgggacaaatattccaagagg
tttcctgagctggagtccttagttcctaatgctttggattatataaggactgtgaaggag
ctagggaacaatctggataaatgcaaaaacaatgagaatcttcagcaaattctgaccaat
gcaactatcatggttgtaagtgtgacagcctccacaactcaggggcagcaattaacagat
gaagaactggaacgaattgaagaagcgtgtgatatggcgctagaactcaaccaatccaaa
cacagaatttatgagtatgtggaatctcgtatgtcattcattgctcctaacctctccatc
attgtcggggcctccactgctgccaagatcatgggtattgctggaggtcttaccaatctc
tcgaagatgccagcttgtaatgtcatgctgctgggagctcagaggaaaacattatctggt
ttctccagcacctcggtgctgccacatacaggatacatttatcacagcgacattgtccag
tccttgccaccagacttgcacagaaaagcagcacgactggtatctgcaaaatgtaccttg
gcagcacgtgttgatagttttcatgagagttcagaaggaaaggttggatatgacctaaaa
gaagagattgaaagaaaatttgataaatggcaagaacctccaccagtcaaacaagtgaag
ccccttcctgctccactggatggacaaagaaagaaacgtggaggccgcaggtaccgcaaa
atgaaggaacgtttggggttaacagaaatccgtaaacaagccaacagaatgagctttgca
gagattgaagaagatgcatatcaggaagatctaggctttagcttgggtcatcttgggaag
tctggaagtggccgaatacgtcaagctcaagtcaatgaagctactaaagctaggatctcc
aagacattacagcgtactctgcaaaaacaaagtgtggtctatggaggaaaatccactatt
agggatcgatcttcgggtactgcttccagtgttgccttcacgcctcttcaggggttggag
attgttaatcctcaggcggcagaaaagaaagtggctgaagcaaaccagaagtacttttct
agcatggcggaattccttaaagtgaaaagtgagaagtctggcaccatgacacagtga
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integrated database retrieval system