Xenopus tropicalis (tropical clawed frog): 407892
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Entry
407892 CDS
T01011
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
407892 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
407892 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
407892 (tars1)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
407892 (tars1)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
407892 (tars1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
407892 (tars1)
Prokaryotic type
407892 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
407892
NCBI-ProteinID:
NP_001001219
Xenbase:
XB-GENE-975289
UniProt:
F6SGS0
LinkDB
All DBs
Position
1:complement(200079216..200113637)
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AA seq
721 aa
AA seq
DB search
MTENVTDQLGNMSLEKQPNVNGGKLKEGGKKKGKDGSGDGGRSEMKPWPEYINQRLEMYN
KLKAEHDTLLADKAAKESKAIKVTLPDGKQVDAESWKSTPYQIACGISQGLADNTVVAKV
NGSVWDLDRPLEEDCTLALLKFDDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENG
FYYDMYLEDGGVSSNDFTSLENLCKKIMKEKQQFERLEVTKETLLEMFKYNKFKCRILNE
KVDTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKVHKNSSTYWEGKADMETLQRVYGISF
PDPKMLKEWEKFQEEAKNRDHRKIGREQELFFFHELSPGSCFFLPKGAYIYNQLIAFIRQ
EYRKRGFQEVVTPNVYNSKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLMFDH
RPRSWRELPLRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEEEIKSCLDF
LRAVYNVFGFTFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWVLNPGDGAFYGP
KIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTYVSHDGDDKKRPVIIHRAILGSVERMIA
ILTENFGGKWPLWLSPQQVMVVPVGPTCDEYAQQVREQFHRAGLMTDVDLDPGCTLNKKI
RNAQLAQYNFILVIGEKEKASGTVNIRTRDNKVHGERTIAETIERLLQLKDSRSKNSEEE
F
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaacgtaacagaccaactgggaaacatgagcctggagaagcagccaaatgtc
aatggaggaaagctcaaagaaggagggaagaagaaaggcaaggatggatcaggagatggg
ggccgcagtgagatgaagccgtggcctgagtacatcaatcagcggctcgaaatgtacaat
aagctgaaagcagaacacgataccttgctggcagataaagcggcaaaggagagcaaagct
attaaagtgacactacctgatgggaaacaagtagatgcagagtcctggaaatccacaccc
taccaaatcgcttgtgggatcagtcaaggtctggctgacaatactgtagtcgctaaagtg
aatggcagtgtctgggacctggatcgcccactggaggaagactgcacactggcacttctt
aaatttgatgatgaggaagcgcaagcggtgtactggcactcaagcgcacacataatggga
gaagctatggagcgggtttatggtggatgtttgtgctatggtccccctattgagaatggc
ttttattatgacatgtatctggaagacgggggggtgtccagcaatgacttcacctccttg
gaaaacctgtgtaagaagatcatgaaggagaagcaacagtttgagaggctggaggtcact
aaagaaacactccttgagatgtttaagtacaacaagttcaagtgccgcattctgaatgaa
aaggttgacactccaaccactacagtgtacagatgcggccccttaatcgatctatgtcga
ggaccccacgtcagacacactggcaagattaaagctttgaaggttcataagaattcctcc
acatattgggaaggtaaggctgatatggaaaccttgcagagagtatatggtatttcgttt
ccagatccaaagatgttaaaagaatgggaaaagttccaagaagaggccaaaaaccgagac
cacagaaagataggaagggaacaagagctgttcttcttccatgagctgagccctgggagc
tgtttcttcttacccaaaggagcctatatttataaccagctgattgccttcatcagacaa
gagtacaggaagcggggtttccaggaggtggtcacccctaacgtctataacagcaaacta
tggcagacatccggccactggcagcactacagcgagaacatgttctcttttgaggttgag
aaggagatctttgctctgaagcccatgaactgcccgggacattgtttaatgtttgatcac
cggccgcgctcctggagggagctgccattgcgaatggcagattttggggttctgcacaga
aatgagctgtcaggggcactgacaggactgaccagagtaaggcgttttcagcaggacgat
gctcacatcttctgtgccatggaacagattgaagaagagatcaagagctgcctggatttc
ttgcgcgccgtttacaatgtttttggatttaccttcaaactaaacctctccacccgacca
gagaagttccttggtgacattgaagtttggaaccaggcagagaagcaactggagaacagt
ttgaatgagtttggtgaaaagtgggtattaaatcctggagatggcgccttctatggacct
aagattgatatccagattaaggacgctatcggccggtaccatcagtgcgccaccatccag
ctcgacttccagcttcccatccgcttcaacctcacctacgtcagccatgatggtgacgac
aagaagagaccagtcattattcaccgcgccatcttgggttcagtggaaaggatgatcgct
atcctcaccgagaactttggaggcaaatggccactctggctctcccctcagcaagtgatg
gtggtgcccgtaggaccgacatgtgacgaatatgcccagcaggtcagagagcagttccac
cgggctgggcttatgactgacgttgatttggaccccggctgcactctcaataagaagatc
aggaacgcacagcttgcgcagtacaacttcattctcgtgatcggagagaaggagaaagcc
agcggaacagtaaacattcgcacccgagacaacaaggtccacggtgaacgcaccatcgca
gagaccatcgagagactgcttcagctcaaggattcacgatccaaaaactcagaagaagaa
ttctaa
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