Xenopus tropicalis (tropical clawed frog): 407911
Help
Entry
407911 CDS
T01011
Symbol
pabpn1
Name
(RefSeq) polyadenylate-binding protein 2
KO
K14396
polyadenylate-binding protein 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
407911 (pabpn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
407911 (pabpn1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
407911 (pabpn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
407911
NCBI-ProteinID:
NP_001001230
Xenbase:
XB-GENE-1007049
UniProt:
Q6NVP7
LinkDB
All DBs
Position
1:139714677..139720944
Genome browser
AA seq
296 aa
AA seq
DB search
MAAVSSAASLRGADYENGLRGGAGPSGGGQDPGEDDPMGRGTLDLDLELLGQGRRSRRVG
GRTAPGRRSGGRGGSGGGGAGGLEELEDEELEEEEPGELTGDQTIEDPELEAIKARVREM
EEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSIEEKMEADARSIYVGNVDYGATAEELE
AHFHGCGSVNRVTILCDKYTGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVVPKRT
NRPGISTTDRGFPRARYRARASSYSSRSRFYSGYTPRPRGRVYRGRARVTSWYTPY
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgtcctcagcggcatcgctgcgtggggcagattatgagaacgggcttcgc
ggcggggccgggccgagtggcggagggcaggacccaggagaggacgatccaatgggccgt
ggcacactagatttggatttggaactgctgggccagggcagaagaagccggcgggttggg
ggccgaacggctccaggcaggagatctgggggacgcgggggctcgggaggaggtggagct
ggcgggttagaggagctggaagatgaggaattggaggaggaagaacctggggaacttacg
ggagaccaaaccatagaggatccggaacttgaagctattaaagctcgtgtgcgagagatg
gaggaggaagctgagaagttaaaggagcttcagaatgaagtagaaaaacagatgaatatg
agcccccctccaggcaatgctgggccagtcatcatgtccatagaggagaagatggaagct
gatgcacgatcaatttatgtaggaaatgttgattatggtgcgacagcagaagaactggag
gctcatttccatggatgtggctccgtgaacagagtcactatactgtgcgacaagtacact
ggtcatccaaaagggtttgcctacattgagttctctgataaggaatcagtcagaacttca
ctggccctggatgagtccttgtttagaggacgtcagattaaggttgtacccaagaggacc
aacagaccaggtatcagtacgacagacagaggcttcccacgggcaagatacagagccagg
gcgtcatcctacagttcacggtcccgtttctacagtggctacacccccagacccagagga
cgtgtgtacaggggtcgggctcgcgtgacgtcatggtatactccttactaa
DBGET
integrated database retrieval system
