Xenopus tropicalis (tropical clawed frog): 407912
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Entry
407912 CDS
T01011
Symbol
preb
Name
(RefSeq) prolactin regulatory element-binding protein
KO
K14003
prolactin regulatory element-binding protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
407912 (preb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
407912 (preb)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
407912 (preb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
WD40_Gbeta
WD40_MABP1-WDR62_1st
WDR55
TRIP4_3rd
Beta-prop_VPS8
PEP5_VPS11_N
VG27
Motif
Other DBs
NCBI-GeneID:
407912
NCBI-ProteinID:
NP_001001231
Xenbase:
XB-GENE-6456920
UniProt:
Q6NVQ7
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Position
5:complement(161578962..>161583067)
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AA seq
422 aa
AA seq
DB search
MGRRRRHPVFYCAPFPLYSVRIDPIRGLIITAGGGGASKTGIKNAVHFLQLEQISGRLSA
SLLHSHDTESRATMNMALAGDVIAAGQDSNCHILRYRVLSQEERADMKKQEKAETNDRTS
RNRKSSRVSIDGGIRGTKDETPEVSIELLHTVQTDTSADTLQKAVCFNPDCTKLLTGGVD
GYLRVWEFPGMKKLLDFKAHNGEIEDIASSPGNKMVSVGQDFRCCVWEADQLLMELHWNE
NLPSIPDKMYRYRACRFGKVPDQQDALCLYTVQIPYKRERRPPPCYLTKWDGLRFLPLVT
QPCGNEVISCLAVSDCGKFLGLGTVTGSVAIYISFSLQRLYYVEEAHGIVVTDLAFFPGS
RRCRDLQGDHETALLSVAVDSRCKLHLVPNRRTFPVWLLLLLCFISVVLVVFLLQETFPD
LL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgggccgacgccgccgccatccggttttttactgcgcccctttccccctgtactctgtg
cggatcgaccccattaggggcctcatcatcacagccggcgggggcggagcctccaaaact
ggcatcaaaaatgcagtgcatttcctgcaactggagcagatttctggccggctgagcgcg
tccctcctgcactcccacgacaccgagagcagagccaccatgaacatggcgctggcgggg
gacgtgatcgctgcggggcaggactccaactgccacattctgcgctaccgggtcctttcc
caggaggagagagcggacatgaagaaacaggaaaaggctgaaaccaatgacagaacatcc
agaaacaggaaatcctctagagtcagcattgatgggggcattcggggcaccaaagatgag
acccccgaagtctccattgagcttctccacacggtacagactgacaccagcgccgacacc
ctacagaaagccgtctgcttcaacccggactgtaccaagctgctcacggggggagtggac
gggtacctgcgtgtgtgggagttccccgggatgaagaagcttctggacttcaaagctcac
aatggtgaaatagaggatattgcatccagccctgggaacaagatggtgagtgtggggcag
gatttccgctgctgtgtgtgggaggcagatcagctgctcatggagctgcactggaacgag
aacctacccagtatccctgataaaatgtacagataccgagcctgcagattcgggaaggtg
ccggaccagcaggacgccctctgtctctacactgttcagatcccctataagagggaacgc
cgcccccccccctgctacctcactaagtgggacggcctgcgcttcctgcccctcgtcacc
cagccgtgtgggaacgaagtcatctcctgcctggcagtcagtgactgcggcaagttcctg
ggcctgggcacggtgaccggctcggtggccatttacatctccttttcactgcagagactg
tactacgtggaggaagcccacggcatagtagtgacagacctggcgttctttccggggtct
cgccgatgccgagatctccagggggaccacgagaccgccctactgagcgtggccgtcgat
agccgctgcaagctccacctggtgcccaatagaagaaccttccccgtgtggctgctgttg
ctgctctgtttcatctcggtggtcctagtggtctttctgctccaggaaaccttcccggac
ctcctatag
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