Xenopus tropicalis (tropical clawed frog): 407927
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Entry
407927 CDS
T01011
Symbol
prim1
Name
(RefSeq) DNA primase small subunit
KO
K02684
DNA primase small subunit [EC:
2.7.7.102
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
407927 (prim1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtr03032
]
407927 (prim1)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.102 DNA primase AEP
407927 (prim1)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
407927 (prim1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_primase_S
Motif
Other DBs
NCBI-GeneID:
407927
NCBI-ProteinID:
NP_998870
Xenbase:
XB-GENE-969075
UniProt:
Q6NVT9
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All DBs
Position
2:complement(138825509..138838394)
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AA seq
420 aa
AA seq
DB search
MDLSVYDPASLPDLLPLYYRRLFPFYQYFRWLNYGGVVKNYFHHREFSFTLKDDAYVRYQ
SFNNQSELEKEMQKMCPYKIDIGAVYSHKPSLHNTVKSGTFQAQEKELVFDIDMTDYDDV
RRCCSSADICPKCWTLMTIAVRILDRALAEDFGFQHRLWVYSGRRGVHCWVCDDSARKLS
QAERSAVAEYLSVVKGGEETIKKVQLSDPIHPFIGKSLKMVERYFEKYALVDQDILENKQ
CWDKVVALVPEVARENLLREFSKARSSVERWDKLSSCLEATVKDLRRHSNIPKEIMLQFC
YPRLDVNVSKGLNHLLKSPFSVHPKTGRISVPIDTKKLDQFDPFSVPTISLICSELDNVC
KKEDDQDSSGEGEPEAKKRTRDYKRTSLAPYIKVFEQFLDKLDQSRKGELLSKSDLKKEF
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcagtgtatgatccggccagtttacctgatctcctaccgctttattaccgg
agactcttccccttctatcagtatttccggtggcttaactacggaggcgttgtaaaaaat
tattttcaccaccgagagtttagctttacattgaaagatgatgcatatgtacgataccag
tccttcaacaatcaaagtgaactggaaaaagagatgcagaaaatgtgtccgtacaaaata
gatattggggctgtttattcacacaagccaagtctacacaacactgtaaaatcaggaact
tttcaagcacaggagaaggagctggtatttgatatagacatgacagattatgacgatgtc
cggaggtgttgcagctctgcggatatatgtccgaaatgctggactctaatgaccattgca
gttcgaattctagacagagcattggcagaggattttggattccagcaccgtttatgggtc
tactcaggcagaagaggtgttcattgctgggtgtgtgatgattctgcaaggaagctttcc
caagctgaaaggtcggcagtggctgaatatctgagtgttgtgaagggtggagaagaaaca
ataaagaaagtccagctctctgatccaattcatccattcatagggaagtctctgaaaatg
gtggaaagatactttgaaaaatatgccttggtggaccaagacatcctagagaacaaacag
tgttgggataaagtagttgcactagttcctgaagttgcccgtgaaaacctgctgcgggaa
ttctcaaaagcacgttcttctgttgaacgttgggataaactctcaagctgtctagaagcc
acagtgaaggatcttaggagacacagtaatatacccaaagaaattatgctgcaattctgt
tatccccgactggatgtgaatgtcagcaaaggactgaatcacttgttgaaaagcccattc
agtgtacaccccaaaacaggacgaatttctgttcctatagacactaaaaagctggaccag
tttgacccattttcagtaccaactataagcttaatatgcagtgagctggataatgtttgc
aaaaaggaagatgatcaagatagctctggtgaaggagaacccgaagcgaagaaacggaca
agagattacaagagaaccagcttggcaccttacataaaggtttttgagcaattcctggac
aaactggatcagtcgaggaaaggggaacttcttagcaaaagtgatttgaagaaggaattt
taa
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