Xenopus tropicalis (tropical clawed frog): 407928
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Entry
407928 CDS
T01011
Symbol
rbm25
Name
(RefSeq) RNA-binding protein 25
KO
K12822
RNA-binding protein 25
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
407928 (rbm25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
407928 (rbm25)
Spliceosome [BR:
xtr03041
]
Complex A
U1 snRNP components
U1 related factors
407928 (rbm25)
Complex B
407928 (rbm25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
407928
NCBI-ProteinID:
NP_998865
Xenbase:
XB-GENE-490152
UniProt:
A0A803KH18
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Position
8:complement(106229174..106251410)
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AA seq
769 aa
AA seq
DB search
MSLMAPGPTVLVPTVSMVGKHLGPRKDMIGLKNKENDDNSGPTTTVFVGNISEKASDMLI
RQLLAKCGLVLSWKRVQGASGKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKLLVKVDA
KTKAQLDEWKASKRASNGSAKPESAADDEDDVDEDTKRRDGIIKGAIEVLIKEYSSELNA
PSQDSDSHPRKKKKDKKEEMSNSVQLQEDINAIEMEEDKRDLISREISKFRDTHKKLEEE
KGKKEKERQEIEKERRERERERERERREREREREKEREKEKERERDRERNKDRDRDRDRD
RDRDRDKDRDRARDHSKDRSRSREKSRDRDRDRDRERDRERERERDRERDREKDKKRDRE
EDEEEAYERRKLERKLREKEAAYQERLKNWEIRERKKAREYEKDAEREEERRRETAKEAK
RLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEG
HPDPDAELQRMEQEEERRRQPPQIKPQPESEEEEEVKPMREEKIEEPVEEEELEPKPCLK
PTMRPISSAPSVSSGSRNATPNSPGDESPCGIIIPHENSPEQQPQEEYRPKIELSLKLGA
PNSPSQPNAAKRKKLPVDSVFNKFDDEDSDEVPRKRKLVPLDYGDDDKTSAKNNVNTEEK
RKHIKSLIEKIPTAKPELFAYPLDWSIVDTTLMERRIRPWINKKIIEYIGEEEATLVDFV
CSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatggcacctggaccaactgtattggtaccaacagtatctatggttgggaaa
cacttggggcctcggaaagacatgattgggctgaaaaataaagaaaatgatgataacagt
ggcccaactaccacagtgtttgtgggaaacatatctgaaaaggcatcagatatgctcatc
aggcagcttttagctaaatgtggcttagtcttaagctggaagagagtacaaggagcatct
gggaaacttcaagcctttggattttgtgagtacaaggaacctgaatctactctgcgagct
ctacggcttcttcatgatctacaaattggggagaaaaagctgcttgtaaaggttgatgcc
aagaccaaagctcagctggatgagtggaaagcatctaaaagggcttccaatggaagtgca
aagcctgaatcagcagcagatgatgaggatgatgtggacgaggatacaaagaggcgggat
gggattataaaaggtgcaatcgaagttctgattaaggagtattctagtgaactgaatgct
ccatcacaggactctgattcgcaccccaggaagaaaaagaaagataaaaaggaagagatg
tcaaacagtgtacaactgcaggaggatataaatgcaatagaaatggaggaagacaagcga
gacctaatatcccgtgaaatcagtaaattcagagatacgcacaagaaattggaggaggag
aaaggcaaaaaagaaaaggagaggcaggaaatagaaaaagagcgcagagaacgtgagcga
gaacgagagagggaaagaagggaacgggaacgtgaaagggaaaaggagcgagaaaaggag
aaagaaagagagcgggatcgtgagcggaacaaagacagagatcgagacagggaccgggac
agggatagagatcgcgacaaagatagagatcgtgcaagggaccacagtaaagacaggagc
cgatcaagagaaaaaagcagagaccgtgaccgagatagggatcgtgagagagatcgtgaa
agggagagagagcgtgatcgagagagggatagagagaaagacaagaaaagagatcgggag
gaagatgaggaagaagcttatgaaaggcgaaaactggaaaggaaactgcgggaaaaagaa
gctgcctatcaagagcgccttaaaaactgggagatcagggagaggaaaaaggcaagagaa
tatgaaaaggatgcagagcgtgaggaggaaagacgcagagaaacggcaaaagaagcaaaa
cgactcaaagagtttttggaagattatgatgatgacagagatgatccaaaatattacagg
ggcagtgccctccagaagaggttaagagaccgtgaaaaggaaatggaagctgatgagcgg
gatcgtaaaagagaaaaggaagagctggaggaaataagacagcgactgttagcagaaggc
catccagatccagatgcagaactgcagaggatggagcaggaagaagagagacggagacag
ccaccacaaatcaagccccagccagagtctgaagaagaagaagaggtgaaacccatgaga
gaagagaaaatagaggaacctgtagaagaagaggaacttgaaccaaagccttgccttaag
cctacgatgcggccaatcagctctgctccctctgtttcttctggtagccgtaatgccact
ccaaattccccaggggatgagtctccttgtggcatcatcattcctcatgagaactcgcca
gagcagcaaccacaagaggaatacaggcctaaaatagaacttagcttaaaattaggtgca
cctaatagtcccagtcagccaaatgctgcaaagaggaagaagttgccagtagatagtgtt
tttaacaagtttgatgatgaagatagcgatgaggtgcctcgaaaaagaaaactggtaccg
ttggattatggggacgatgacaagacctcggccaaaaacaatgtgaacacagaagagaaa
cggaagcatattaagagtcttatagagaaaattcccacagccaaaccagagctatttgct
tatcctttggactggtctattgtggacactacattaatggagagacgaattcggccgtgg
ataaataagaagattatagaatatataggcgaagaagaagcaacattagttgatttcgtc
tgttcgaaagtaatggcccacagttcgcctcagagcatactggatgatgttgcaatggtt
ctggatgaagaagcagaagtattcattgtgaaaatgtggaggcttttaatttacgaaacc
gaagctaagaagattggccttgtgaagtag
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