Xenopus tropicalis (tropical clawed frog): 407935
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Entry
407935 CDS
T01011
Symbol
dync1i2
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04814
Motor proteins
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
407935 (dync1i2)
09142 Cell motility
04814 Motor proteins
407935 (dync1i2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
407935 (dync1i2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
407935 (dync1i2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
407935 (dync1i2)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
407935 (dync1i2)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
407935 (dync1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
407935
NCBI-ProteinID:
NP_998848
Xenbase:
XB-GENE-960812
UniProt:
Q6NVK8
LinkDB
All DBs
Position
9:complement(67721853..67773670)
Genome browser
AA seq
637 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEEKKKKETDQKKDAAPTQEESDLEKKRREAE
ALLQSMGITAEPPMVPPPTSPSSKSVSTPSEAGSQDSGDGAGGASGRTAVTTKTLHWDTD
PSVLQLHSDSDMGRGPIKLGMSKVTQVDFAPRETVSYTKETQTPILAQDNEGDEDEEETV
APKAVAIQEEDKPEKKEEKTEAPPHELTEEEKQQIIHSEEFVSFFDHSTRIVERALSEHV
NIFFDYSGRDLEEKEGEIQAGAKLSFNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNN
NEDAPHEPDGVALVWNMKYKKMTPEYVFHCQSAVMSAAFARFHPNLVVGGTYSGQIVLWD
NRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSQPQDS
MELVHKQSKAVAVTCMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITG
IHCHSAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNSDYVYDVMWSPTHPALFA
CVDGVGRLDLWNLNNDTEVPTASITVEGNPALNRVRWTHSGREIAVGNSEGEIFIYDVGE
QIAVPRNDEWTRFARTLAEINANRADAEEEAANRIPG
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaggctgaactggagcgcaagaagcagcgcttggctcag
ataagggaggagaaaaagagaaaggaagaagagaagaaaaagaaagaaacagatcagaaa
aaggatgctgcacccacacaggaagagtcagacttggagaaaaaaagaagagaagcagaa
gccttattgcaaagcatggggatcactgcggagccccctatggtccctcctccaacatct
ccctcctctaaatccgtgagcaccccaagtgaggctggaagccaggattctggagacggt
gcaggtggagcaagtggcaggactgcagttaccacaaagactctgcactgggatactgac
ccgtctgttcttcagcttcactctgattccgatatggggcgaggtcccattaaacttggc
atgtccaaggtcactcaagtggatttcgctcctcgagaaactgtcagctacacgaaggaa
actcagaccccgatcctggctcaggataatgagggtgatgaagatgaagaggaaacggtt
gcacccaaagcagttgcaattcaagaggaggacaaaccagaaaagaaagaggaaaaaact
gaagctccaccccacgagctcacagaagaggagaagcaacagattattcactcggaagag
tttgtaagtttctttgaccacagcaccagaatcgtagagcgggccctttcggaacacgtc
aacattttctttgattacagtggcagggacctggaagagaaagagggagaaatccaagca
ggtgcaaagttgtcctttaaccgacagttttttgacgagcgttggtcaaagcatcgtgtt
gtcagctgcttggattggtcgtcccagtacccggaattgctcgttgcttcttataacaac
aacgaggatgcccctcatgaacctgatggcgtggctctcgtgtggaacatgaaatacaag
aagatgaccccagagtatgtgtttcactgccagtctgcagttatgtccgctgctttcgca
agatttcatcccaacctcgtggtagggggaacctactctgggcaaattgttctgtgggac
aatcgaagcaacaagaggactccggttcaaaggactcccctctcagctgctgctcacaca
catcctgtgtattgtgtcaatgtggtcggcacccagaatgcccacaatttgatcagcatc
tcgacagatggcaagatttgttcttggagcctggatatgctttctcagccacaggacagc
atggagttggttcacaagcagtcgaaggcagtagctgtcacctgtatgtccttcccagtg
ggagatgtcaacaactttgtggtgggaagcgaggaaggttcagtgtacacagcatgtcgc
cacggcagcaaagccggtatcagtgagatgtttgagggccaccaaggaccaatcacaggg
atacattgccattccgctgtcggagctgtcgacttctcacatttgtttgtcacttcttct
tttgattggacagtgaaactttggacaactaagaataataagcctctctattcgtttgaa
gacaactctgattatgtctatgacgtcatgtggtctccaactcaccccgccctttttgct
tgtgtcgatggagtggggagacttgacctgtggaatctgaacaatgacacagaggtgccc
actgccagcattacagtagaaggaaaccccgccctaaatcgtgtgcgatggactcactca
gggagagagattgctgtcggaaactcagaaggagaaattttcatctatgatgtgggagag
caaatagcagtacctcgtaatgatgaatggacccgttttgccagaacccttgcggagatc
aatgccaacagggccgacgctgaggaggaagcggcaaaccgcatacccggctga
DBGET
integrated database retrieval system
