Xenopus tropicalis (tropical clawed frog): 407948
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Entry
407948 CDS
T01011
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
407948 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
407948 (nup93)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
407948 (nup93)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
407948
NCBI-ProteinID:
NP_998879
Xenbase:
XB-GENE-5823109
UniProt:
Q6NX12
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All DBs
Position
4:43615648..43642243
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AA seq
820 aa
AA seq
DB search
MDGEGFGELLQQAEQLAAETEGVTELPHVERNLQEIQQAGERLRSKTMTRTSQESANVKA
SVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKR
TFVMAEEYHRESMLVEWEQVKQRVLHTLLASGEDALDFTQESETSYISESGAPGRSSLDN
VEMAYARQIYMYNEKVVSGHLQPSLVELCTEAAERLDDKNVSDLWVMVKQMTDVPLIPAS
DSLKSRCSVQMQMAFLRQALHFLEQSYKNYTLMSVFANLQQAQLGGVPGTYNLVRSFLNI
RLPAPIPGLQDGEVEGYPVWALIYYCMRCGDLMAAQQVVNRAQHQLGDFKNCFQEYVHSK
DRRLSPTTENKLRLHYRRAVRASTDPYKRVVYCIIGRCDVTDNHSEVADKTEDYLWLKLS
QVCFEDEANSSPQDRLTLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFL
FRLERTRCHAVHVALALFELKLLLKSTGQSAQLLSLEPGDPQGVRHLNFIRLLMLYTRKF
EPTDPREALQYFYFLRNEKDSQGESMFLRCVSELVIESREFDMLLGKLEKDGSRKPGAID
KFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQISAPQSN
RERLKNMALAIAERYKSQGVSAEKSINSTFYLLLDLITFFDEYHAGHVDLAFDVIERLKL
VPLSQDSVEERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGSGPNTLGRPQRAQE
DKDSVLRSQARALITFAGMIPYRMSGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaagggtttggagagcttctgcagcaggctgagcagcttgctgcagaaaca
gaaggagttactgaactacctcatgtagagaggaacctacaggagatccagcaggctggt
gagaggttgcgctccaaaaccatgactcgcacttctcaggagtcagccaatgtgaaagcg
tctgttctgctgggatcaagaggtcttgacatctctcacatttcccagaggcttgagagt
cttagtgcagccacaacattcgagcctttggaacctgttaaagacacggatatccagggt
tttcttaagaatgagaaggacaatgctcttctgtctgccattgaagaatccaggaagaga
acatttgtgatggctgaagaataccacagggagtccatgcttgtagagtgggaacaagta
aaacagagagtcttacacaccctgcttgcttcaggagaagatgcgctagactttacacag
gaaagtgagacaagttatattagcgagtctggagcaccaggtcgcagttcactagataat
gtggaaatggcatatgcgcgacagatttatatgtacaatgagaaggttgtgagtggtcat
ctgcagccaagtctggttgaactgtgcacagaggctgctgaaagactagatgacaagaat
gtgtcggatttatgggttatggtgaagcagatgacagatgttccattgattccagcctct
gactctctgaaaagccgttgtagtgttcagatgcagatggctttcctacgtcaagcatta
cattttctagagcaaagctataaaaattatactctgatgagtgtatttgccaacctgcag
caggctcagctcggaggtgttcctggaacctacaatcttgtgagaagcttcctgaatatt
agattgccagcaccgatcccaggccttcaggatggagaagttgaaggttacccagtatgg
gctctgatctactactgtatgcgctgtggagatcttatggcagctcagcaagtggtgaac
agggcccagcatcagctaggagatttcaagaattgttttcaagaatatgtgcacagtaaa
gacagacggttatctccaacaacagagaacaagcttcgcctacattacagaagagctgta
agggcaagcactgacccttacaaaagagttgtgtactgcataattggaagatgtgatgta
accgataaccacagtgaagtggctgataagacagaggattacttgtggctaaagttaagt
caggtttgttttgaagatgaagctaacagttctcctcaagacaggctgacattgccacag
tttcaaaagcagctatttgaggactacggtgaatctcactttgctgttaatcaacagccg
tacctatacttccaagtcctcttcctgacagctcagtttgaggcagctattgcttttttg
tttcgtttggaacgtacacgttgtcatgctgtgcatgtggcacttgctctgtttgagctg
aaattgcttctgaagtcaacagggcaaagtgcacagttattgagtctagaaccaggtgac
cctcagggtgtcaggcacctaaatttcatccgtcttttgatgctctatactaggaagttt
gagcccacggaccccagggaagctttacaatacttttattttctcaggaatgagaaggac
agtcaaggtgaaagcatgttcctccgatgtgtcagtgagctggtgattgaaagtcgagag
tttgacatgcttctggggaaattagaaaaagatggaagccgaaagcctggagcaattgat
aaattcacaagagataccaagacaatcattaataaggtagcatctgtggcagaaaacaag
ggactgtttgaggaagctgcaaagttgtatgaccttgcaaagaacccagacaaggttttg
gagctgaccaataaactattaagtcctgtggtatcccagatcagtgccccacagtctaac
cgagagcggctcaagaacatggctctagctattgctgagagatacaaaagtcaaggtgta
agtgcagagaaatccattaactcaacattttaccttctcctggatttgataacctttttt
gatgagtatcatgcagggcatgttgaccttgcttttgatgttattgaaagactaaagttg
gtgcctttgagtcaggatagtgtagaagagagagtggcagccttccggaacttcagtgat
gagatcagacataacctgtctgaaattcttcttgcaaccatgaatattttattcacccaa
tacaagaggctgaagggtagtgggccaaatactttagggcgtccacagagagcacaagag
gataaggattcggtcctacgcagtcaagctcgtgctcttatcacctttgcagggatgatt
ccatacaggatgtctggggacacaaatgcccgacttgtacagatggaagttctcatgaat
tga
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