Xenopus tropicalis (tropical clawed frog): 407962
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Entry
407962 CDS
T01011
Symbol
calr
Name
(RefSeq) calreticulin precursor
KO
K08057
calreticulin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
xtr04145
Phagosome
xtr04148
Efferocytosis
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
407962 (calr)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
407962 (calr)
04148 Efferocytosis
407962 (calr)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
407962 (calr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xtr03110
]
407962 (calr)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xtr04091
]
407962 (calr)
Chaperones and folding catalysts [BR:
xtr03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
407962 (calr)
Lectins [BR:
xtr04091
]
L-type lectins
407962 (calr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DDHD
Motif
Other DBs
NCBI-GeneID:
407962
NCBI-ProteinID:
NP_001001253
Xenbase:
XB-GENE-1018213
UniProt:
Q6NVT6
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Position
3:complement(139714586..139721271)
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AA seq
416 aa
AA seq
DB search
MARVAFLILPLLAALCIADPAVYLKEEFADGDGWSQRWVESKHKSDYGKFKLSAGKFYGD
AEKDKGLQTSQDARFYALSTRFDSFSNKDKTLVIQFSVKHEQNIDCGGGYVKLFPAELEQ
SEMHGESEYNIMFGPDICGPPTKKVHVIFQYKKKNLQINKDIRCRDDSFTHLYTLIVRPD
NTYEVKIDNSKVESGSLEEDWDFLPAKKIKDPEAKKPDDWDERPKIDDPEDKKPEDWDKA
EHIPDPDAVKPEDWDEEMDGEWEPPVIQNPDYKGEWKPRQIDNPDYKGKWIHPEIDNPEY
TPDSTLYQYDSFGVLGLDLWQVKSGTIFDNFLMTDDEKYAEEYGNETWGVTKEAEKKMKE
QQDEEDRKKQEEEEKKRKDEEPQEEEEDDDDEEEEKEEEKEEEEEDEEETPLKDEL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttgccttcctcatcctgccgctgcttgcggctctgtgcatcgcagatcct
gctgtttacttaaaggaagagttcgctgatggagatgggtggtcgcagcgctgggtagaa
tccaagcacaaatctgactatggaaagttcaagctaagcgccgggaagttctacggagac
gcagagaaggacaaaggtctccagacaagccaggatgcccgcttctacgccctgtctacc
cgctttgattccttctccaacaaagataagacccttgtcatccagttttccgtaaagcac
gagcagaacatagactgcggcggcggatacgtgaagcttttccctgcggagctggagcag
tccgaaatgcacggcgaatcagagtacaacatcatgttcggccctgacatttgcggcccc
cccacaaagaaggtgcatgttatcttccagtacaagaagaagaaccttcagatcaacaag
gatatccgctgcagggacgattctttcacccacttgtacaccttgatcgtgcgcccagac
aacacctatgaagtaaagattgacaacagcaaggtggaatccggaagcctggaggaggac
tgggacttcctgccagccaagaagattaaggacccagaggccaagaagcccgatgactgg
gacgagcgccccaagatcgatgacccagaagacaagaagccagaggattgggataaggct
gaacacattccagaccctgatgccgtgaagcctgaagactgggatgaggagatggatggc
gagtgggagcccccagttatacagaacccagactacaagggagaatggaaaccccgtcag
atcgataacccagattacaaaggaaagtggatccatcctgagatcgataacccagaatac
acccctgatagtactctgtaccagtatgacagctttggggtactcggcctggacttgtgg
caggtaaaatccggcaccatttttgacaactttctgatgacagatgatgagaaatacgca
gaagaatatggaaatgagacctggggggttacaaaggaagcagaaaagaaaatgaaggaa
cagcaggatgaggaggatcgcaagaaacaggaagaggaagagaagaagaggaaggacgaa
gagccacaggaagaggaagaggatgatgatgacgaggaggaggaaaaagaggaagaaaag
gaagaagaggaggaagatgaagaagaaacacctctaaaagatgagctttaa
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