Xenopus tropicalis (tropical clawed frog): 407964
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Entry
407964 CDS
T01011
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
407964 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
407964 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
407964 (kars1)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
407964 (kars1)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
407964 (kars1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
407964 (kars1)
Prokaryotic type
Other AARSs
407964 (kars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TRM10_TRM10A
DUF374
Motif
Other DBs
NCBI-GeneID:
407964
NCBI-ProteinID:
NP_001001255
Xenbase:
XB-GENE-943468
UniProt:
Q6NVL8
LinkDB
All DBs
Position
4:complement(64316482..64329857)
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AA seq
578 aa
AA seq
DB search
MADVEAAAPGNSEPKLSKNEQKRRLKAEKKATEKEAKHKEQNEKLHTEEAAIDEETLDPN
QYFKIRTQAIQQLKGTKDDPYPHKYHVDMSLTEYIQKYNNLQTGDQLSEVVSIAGRIHAK
RISGAKLIFYDLRGEGTKLQVMANSRFYKSEEEFATINNKLRRGDLIGVKGNPGKTKKGE
LSIIPHEMILLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFIVRAKLITYLR
KFLDDLGFLEIETPMMNVIPGGAVAKPFITYHNELDMKLYMRIAPELYHKMLVVGGIDRV
YEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYYDLMEITEKLLSGMVKHITGGYKVIYHP
EGPEGPEYEIDFTPPFRRISMVHELEKALGKKLPATDQFDTEETRKLLDDICVEKEVECP
APRTTARLLDKLVGDFLEVTCINPTYICDHPQIMSPLAKWHRSEKGLTERFELFVMKKEI
CNAYTELNDPVRQRELFEDQAKAKAAGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRVA
MFLTDSNNIKEVLLFPAMKPEDNKKDPNSTPNSDGTSV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtagaggcagctgctcctggtaactctgagcccaaactgagcaagaatgag
caaaagaggcgattgaaagctgaaaagaaagccactgaaaaggaagccaagcacaaagaa
cagaatgagaaactgcacacagaagaagctgctattgatgaggaaaccttggatcctaat
caatatttcaagattcgtacacaggcaattcagcagctgaaaggcacaaaggatgacccc
tatcctcacaagtaccatgttgatatgtccctcacagagtacattcagaagtacaacaac
cttcagactggagaccagttatcagaagttgtcagtatagcaggtcgaatccatgccaag
cgtatttctggagctaaactaattttctatgatttgcgaggtgaaggaacaaagttgcaa
gtgatggccaattcacgattttacaaatctgaggaagaatttgcaacaattaataacaag
ctccgtaggggtgatttgattggagttaaaggaaatcctggaaaaactaaaaaaggggaa
ctgagtatcataccacatgaaatgattctgctttccccatgtcttcatatgcttccacat
ctccactttggattgaaagacaaggaaactagatatcgacagcgatacctggatcttatc
ttgaatgactatgtgagacagaaattcattgttcgtgccaagcttataacatatcttaga
aaattccttgatgatttaggattccttgagattgaaactccaatgatgaacgttattccg
ggaggtgcagtagccaaaccgttcattacctatcacaatgagttggacatgaagctatat
atgagaatagctcctgagctataccacaagatgcttgtggttggtggaattgacagagtc
tatgaaataggcaggcagttccgaaacgagggaattgacctcacccacaatccagagttc
acaacatgtgaattttacatggcatatgcagactactatgatctcatggaaatcacagaa
aaattgctctcaggtatggttaaacatattactggtggttacaaagtaatctaccaccct
gagggaccagaaggcccagaatatgagattgacttcactccacccttcagaagaataagt
atggtacatgaacttgaaaaagccttggggaaaaaattgcctgcaacagaccagttcgac
acagaagaaacccgcaaacttcttgatgacatttgtgtggaaaaagaggttgagtgccca
gcaccaagaaccactgccaggctgctagacaagctcgttggagatttcctggaggttacc
tgtattaatccaacatatatttgcgaccatccacaaattatgagccctcttgcaaaatgg
caccgatctgaaaagggacttacagagaggtttgaactttttgtaatgaaaaaggagatc
tgcaacgcctatacagagttgaatgatccagtcaggcaaagggagctgtttgaagatcaa
gctaaggccaaagcagcaggtgatgatgaggcaatgttcattgatgagactttctgcact
gcactagagtatgggcttccaccaactgctggatggggaatgggcattgatcgagtggcc
atgtttcttacagattccaataacataaaggaggttttactctttcctgccatgaagcct
gaagataataagaaagatcctaattcaaccccaaattctgatgggacatctgtgtaa
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