Xenopus tropicalis (tropical clawed frog): 447948
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Entry
447948 CDS
T01011
Symbol
dctn1
Name
(RefSeq) dynactin subunit 1 isoform X8
KO
K04648
dynactin 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04814
Motor proteins
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
447948 (dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
447948 (dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
447948 (dctn1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
447948 (dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
447948 (dctn1)
Membrane trafficking [BR:
xtr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
447948 (dctn1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
447948 (dctn1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
447948 (dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Filament
Motif
Other DBs
NCBI-GeneID:
447948
NCBI-ProteinID:
XP_002936330
Xenbase:
XB-GENE-5933522
UniProt:
A0A8J0QRY9
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All DBs
Position
1:complement(16309519..16353617)
Genome browser
AA seq
1268 aa
AA seq
DB search
MAQSKRHTYSRTPSSSARMSVEATGKPLKVGSRVEVIGKGYRGTVAYVGATLFATGKWVG
VILDDSKGKNDGTVQGRRYFTCEENHGIFVRQSQIQVIEDGADTTSPETPEPAASKGLKK
DVSETPKSSKLITTRRTKPTRPSSSAASSGTAGASGSASASCGEISSSEPSTPAQTPLAA
PIIPSPSSAILSPVAPLPGPGPTKEEENLRAQVKDLDEKLETLKMKRAEDKAKLKELEKS
KLQLEQLQEWKSKMQEQQADVQRQLKEAKKEAKEALEAKERYMEEMADTADAIEMATLDK
EMAEERAESLQQEVDTLKDKVEELKIDLEIFKHEIEEKGSDGAASSYQVKQLEEQNARLK
EALVRMRDLSASEKQEHVKVQKQMEKKNTELDTLRQQKEKLQEEASLMEKTIDELKEQVD
AALGAEEMVETLTERNLDLEEKVRELRETVSDLEAINEMNDELQENARETELELREQLDM
AGARVREAEKRVEAAQETVADYQQTIKKYRDLTAHLQEVNRELRNQQEASVEKEQQPSPE
MFDFKIKFAETKAHAKAIEMELRKMEVSQANRHVSLLTSFMPDSFLRHGGDHDCILVLLL
IPRLICKAELISKQAQEKFELSEASEQKSGMRGAVGEQMSFAAGLVYSLTLLQATLHKYE
QALDKCSVEVYKKVGMLYPEMSVHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLY
SIHLADQSEECTMQLSDHIKFTQSALDCMGVEVSRLRAFLHVGQESSDFAILLKDLETSC
SDIRQFCKKIRRRMPGTEAAGIPAALSFAQPVCETLLDCRKYLKCVVAVFQEVAAAGAQM
IAPMGENEGLQALKLEDVAFKATEQIYGSKGSNPYECLRQSCSVVIATMNKMATAMQEGE
YDAEKPQSKSPPPVEQRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEAN
VRLSLLEKKLDSASKEADDRVEKIQTKLEETQTVLKKKEKEFEETMDALQADIDQLESEK
AELRQRLNNQSKRTIEGLRGSPASGVASIVSGLAGEEEQRGVSSGQSLLNGSGPVQVKDS
PLLLQQIDALRLSMKHLKHENNKLKAHQIKADLASLPALHVPKLSLPKDRQREEALSGTL
YRKTSQLLDALQQMSANAKVVDIAHKKAGSPAVHLLEQTARLKSLSDTIDKLKDEVMKET
VAQCPGANVPTDFATFPSSDFIKAKEEKKEDTVYIGKVTLSCQPGHGQIHKLVLTPEQLH
ELHERLIC
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagtaagcggcacacctacagccggaccccgagctccagcgccaggatgagt
gtggaggccacgggcaagcctctgaaagtgggctcccgagtggaggtgatcggcaaagga
taccgtgggacggtggcttatgtgggcgccactctctttgccacagggaaatgggtggga
gtcattctggatgactccaagggaaagaatgacggcactgtgcagggaaggagatacttc
acatgtgaggagaatcatgggatatttgtgcgccagtcccagatccaggttatagaggat
ggggccgacaccacatcccctgaaaccccagagccggctgcttctaagggtctcaaaaaa
gatgtgtcggaaacgccaaagagcagcaaactgatcaccacccggcgcaccaagcccacc
cggccctccagctcagccgcatccagtgggacagccggagcgtcaggctctgcatctgca
tcatgtggcgagatcagcagcagcgagcccagtacccctgcccagactccgctggctgct
cccatcatcccttcaccctcctccgctatcttgtcgccagtagcccctctgcctggccca
ggccccaccaaggaggaggagaatctccgggcccaggttaaagacctggatgagaagttg
gagaccttgaagatgaagagagcagaagacaaggccaaactgaaggagctggagaagtcc
aagcttcaactggagcagctgcaggagtggaagagcaaaatgcaggagcagcaggcagac
gtccagcgacagctcaaggaggccaagaaggaagccaaagaagctctggaagccaaagag
cgctacatggaagagatggcagacaccgctgatgccatagagatggccaccctggataag
gagatggccgaagagcgggcagaatctctgcagcaggaggtggacaccctaaaagataag
gtggaagaactcaaaatagatctggaaatctttaagcatgagattgaggagaaagggtca
gatggagccgcttccagttatcaggtcaaacagctggaggaacagaacgcaagactgaag
gaagccctggtccggatgcgggatctgtcggcctcagagaagcaggagcatgttaaggtg
cagaagcaaatggaaaagaagaacacagaactggacaccctacggcagcagaaggagaag
cttcaggaggaggcctcgctgatggagaagaccattgatgagcttaaggagcaggttgat
gcagctctgggagctgaagaaatggtggaaaccctgacagaacgaaacttggaccttgaa
gaaaaagtccgggagctgagagagaccgtcagtgacttggaagccattaatgagatgaat
gatgagctgcaggagaacgcccgcgagaccgaactggagctcagggagcagctggacatg
gccggcgcccgggtacgagaagcagaaaaacgcgtggaagctgcgcaggaaaccgttgca
gactaccagcagactatcaagaagtaccgggacctgactgctcacttgcaggaagtgaac
cgtgagctgaggaaccagcaagaggcctcggtggagaaggaacagcagccgtcgccagaa
atgtttgacttcaagattaagtttgcggagaccaaggcccacgcaaaggccattgagatg
gagctgagaaagatggaggttagtcaggccaatcggcatgtgtccctgctaacatccttt
atgccagacagcttcctgcgacacggaggggaccatgactgcattctggtgctcctactg
atccctagactgatctgcaaggcggagctgatcagcaagcaggcgcaggagaagtttgag
ctgtcggaggcgagcgagcagaagagcggcatgagaggagccgtaggggagcagatgagc
tttgcagctggactggtctattccctgaccctcctgcaggccacactacacaaatatgag
caggctctggataagtgcagcgtagaagtgtataagaaggtcgggatgctgtacccagag
atgagtgtccatgaacgctctttggatttcctcattgagctgctgcacaaagaccagctg
gatgagaccgtcaacgtggagcccctcaccaaggccattaagtactatcagcacctgtac
agtatccacctcgctgaccaatcagaggaatgcactatgcagctgtctgaccacatcaag
ttcacccagagcgccctggactgtatgggagtcgaagtgagccgtctgagagccttcctg
cacgttgggcaggagagctcggactttgccatccttctgaaggatctggagacctcgtgc
agtgatatccgccagttctgcaagaagatcagacggcgaatgcctggcacagaggcagct
ggaatccctgcggctctcagctttgcacagccggtctgtgagacattgctggattgtcgc
aaatatctcaagtgcgtggtggccgtgttccaggaagtggcggctgccggcgctcagatg
atcgcccctatgggagaaaatgagggcctgcaagctttgaagctggaagatgtggccttt
aaagctaccgaacagatttatggttcaaagggcagtaacccatacgagtgcctccgccag
tcttgcagtgttgtgattgccaccatgaataagatggccactgccatgcaggaaggggag
tacgatgcagagaagcctcaaagcaagtcacctcctccggtggaacagagagcggcggct
ctgcgggcagagataactgatgcagaagggctcggcctgaagttggaggatagagagact
gtcatcaaagagctgaaaaaatctctaaaaataaagggcgaggagctcagtgaggccaat
gtgcggctcagcctcctggagaagaagttggacagtgcctccaaagaggctgatgatcgg
gtggagaagatccagactaagctggaggagacacagactgtgcttaagaagaaagagaaa
gagtttgaggagacaatggatgcgctccaggccgacatcgaccaactggagtctgagaaa
gccgagctccgccaaaggctcaacaaccaatcaaaacgcactatcgagggcctgcgtggt
tcacctgcatctggtgtggcttctattgtatctggacttgcaggagaggaagagcagcga
ggagtatcatctggccagtccttgctaaatggctctggcccagtccaagtgaaggattct
ccattgctgctgcagcaaattgatgccttgaggctttcaatgaaacacctgaagcatgag
aacaacaagctaaaggcccatcagataaaggcagatctggcctccttgcctgcattgcat
gtgcccaagctttccctccccaaagaccggcagagggaggaggccttgtcaggaaccctg
taccgaaagaccagccagctgctcgacgccctgcagcaaatgagcgccaacgccaaggtg
gtggatatcgcacacaagaaagcaggaagtcctgcagtgcatctcctggagcaaacggcc
cgactcaagtctctgagtgacaccatagacaaactaaaggatgaagtaatgaaggagacc
gtggcacagtgtcccggggcgaacgttcccacagactttgccaccttcccgtcctcagac
tttattaaggccaaggaagagaagaaagaagacaccgtttacattggcaaagtgaccctt
tcatgccagccgggacacgggcaaatccacaagcttgtgctgaccccggaacaactgcac
gagctgcacgaacggctgatctgctag
DBGET
integrated database retrieval system
