Xenopus tropicalis (tropical clawed frog): 447949
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Entry
447949 CDS
T01011
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
447949 (rrp12)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
90S particles
Other 90S particles
447949 (rrp12)
Pre-60S particles
Other pre-60S particles
447949 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_EF3_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
447949
NCBI-ProteinID:
NP_001075884
Xenbase:
XB-GENE-993600
UniProt:
A2VCY8
LinkDB
All DBs
Position
7:complement(32900570..32962741)
Genome browser
AA seq
1290 aa
AA seq
DB search
MGKAGKLRSGSAGKSKRWKKGHSSDSNPELRRHREAARSRFFSRPSGKSDLTVDALKLHN
DLQSDTLSVQKKLENSEGLMEDEDEMAITEKSGVSFLSGLSDCTNLTFGKVQRYWESNSA
AHKEICAVLAAVTEVIRSQGGKESETEYFAALMTTLEAVESPESLAAVTYLLNLVLKRVP
GPVLIKKFSDTSKALMDIMASQASSGSTSAMRWIVSCLAVLLRKQDLLTWSYPSTLQVYH
GLLSFTVHAKPKIRKAAQLGVCSILKGSEFMFSESAPKHHPAVQTTAKFCIQEIEKSGGS
KEATTTLHMLTLLKELLPCFPVSMVKSCCETLLKVMTLSNVLITACAMQAFHGLFHSCPG
TSALTAELNAQIITALYDYLPNENDLQPVLAWLAVMEKAHTNLARLQSELCLGHLPRLFL
TTMNCLLSPHLQVVGAAARTLKTLLTECIAPNAADIGSVPLAPTSGPAGLICKMFRCVEE
GLSYKFHSSWPYVLQVLQTFFEAAGKNCHPFMRKCLQTLADLRTSAHFSYTGELDHAVGA
AVESMGPEVVLKAIPLQIDGTEESCDFPRSWLVPVIRDNVKNTELGFFTKYFLPLAAKLK
NRAADLSQDGRNLEAKIYDTLQWQIWTMLPGFCTKPTDVVDSFKGIARTLGMAINDRPDL
RLTVCQALRSLINKGCESEADKAEVSRFAKNFLPILFNVYSQPPAPGEGPSQKLPVLDTV
KAYLTITDQQMVSGFLDKATVKLTEAESAEPTRLYMLDLIIAMAPYADEPSMTKIYHTIL
PYLEDKNHSLQKKAYRVLEEICGGEQPPCKEFVNNNLEELKKTLLTSLKSASSPAKRPRL
KCLIHIVKQLAADHEEFITSLIPEVMICTREVSVGARKNAYTLLAEIGYAFLRFNHDQKE
AMEQYLAVVYAGLTGSVTMISCAVLTLTRLLFEFKDQMGLQVIEHLLENVCLLLGSRTRE
VVKAALGFIKVIIFIMDIKVLSKQLQMMMEAIGNINSDMRRFFRVKLKNIFTKFIRKFGF
ELVKSMLPEAYHKVLVNIRKAEARNKKQKALKQAAAVGEEDDQETKKLEGNSMEDILADS
DEEVEEDEEKPTKQQKKLARQKSQAWLKEGEEDDPLNFLDPKAAQRVLATRPDGKSTKLK
HDFKTSSDGRLIIQDDEVEEDKSKAVDEEMADLMQEVGIRSKKAQKKRFREDNDDDDDAT
DKKPQYKSGGSGIHRPISKKPESGANYKSKKGKGDVKQKGKHDPFAYIPLNKATLNRRKK
AKMQGQFKGLVRAAQRGAQSGLKKRKDRRL
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggcagggaaattgcgctccggttctgccgggaaaagcaagcgctggaagaag
ggacacagcagcgactctaaccccgagctgcggcgccaccgagaagctgccaggagccga
ttcttcagccggccctcaggtaaaagtgacctcacggtagatgctcttaagctccacaat
gaccttcaatcagacaccttgtctgtgcagaaaaaattggagaattccgaagggcttatg
gaagatgaggatgaaatggcaataactgagaaatctggagtttctttcctgagcggcctg
tccgactgcactaatcttacatttggaaaagtgcagaggtattgggagtccaactcggct
gcacataaggagatctgtgctgtgctggctgctgttactgaagttattcgctctcaggga
ggaaaagagtcagagactgaatactttgctgctctgatgactactcttgaagctgtagag
tcccctgagtcattggctgcagttacatatctgcttaacctggttctcaagagggttcct
ggacctgttcttatcaagaagttttctgatacatccaaggcccttatggatatcatggct
tctcaagcaagcagcggcagcacctctgctatgagatggattgtctcttgtctggctgtg
ctgctccgcaagcaggatcttctcacatggagctacccctcaaccctccaagtgtaccat
gggctactcagtttcactgttcatgcaaaacctaaaatccgcaaggcggcccagctaggg
gtgtgttccatcctaaagggcagtgagttcatgttcagtgaatcggcacctaaacaccac
ccagctgttcaaaccacagctaaattctgtatccaggaaatagagaagtctggaggtagt
aaagaagccactacaaccttgcatatgctgacattactaaaggaactgctgccctgcttc
cctgtcagtatggtgaaatcttgctgtgagaccctgctaaaggtcatgactctaagcaac
gtgcttatcaccgcgtgtgcaatgcaggccttccatggtctcttccattcatgccccgga
acctctgctctgactgcagagctcaatgcccaaatcattacagccctatatgactacttg
cccaatgagaatgacctacaaccagttttggcatggttagcagtcatggagaaggcccac
accaatttggccaggttgcagagtgagctgtgcctgggccatcttcctcgtctcttctta
acaaccatgaactgcttattatctcctcacttgcaggttgttggtgcagctgcccggacc
ttgaagactctccttactgaatgcattgctccaaatgctgctgacattgggtctgtgcca
ttggctccaacttctgggccagctgggctcatctgtaaaatgttcaggtgcgtggaagag
ggattatcatataaatttcactcatcttggccatacgtccttcaagtcttacaaaccttt
tttgaagcagcgggaaaaaattgccatccgttcatgagaaagtgtttgcagactcttgct
gacttgagaacctcagcgcatttttcctacactggagagttggatcatgctgtgggcgct
gctgtggaaagtatgggtcctgaggttgtcctgaaagccattcctctgcagattgatggc
acagaggaatcttgcgacttccctcgaagctggctggtcccggtgatacgagacaatgtg
aagaacacagagctaggtttctttaccaagtactttctgccgctggctgccaagttaaag
aatcgggctgctgatctatctcaagatggacgaaatcttgaagcaaaaatttatgatacc
ctccagtggcaaatctggacaatgttacctggattttgcaccaaacccacagatgttgta
gattccttcaagggaattgcacgcaccctgggaatggcaatcaatgatcgtccagacctg
agacttacagtctgccaagctctgcgatcacttatcaacaagggttgtgaatcagaggct
gacaaggctgaagttagccgctttgccaagaacttcctcccaattctgtttaatgtgtac
agtcaaccgccagctccaggagaggggccctctcagaaactgccagtgttggacacagtt
aaagcatatctcacaatcacagaccagcagatggttagtgggtttttggataaagcaact
gtcaaactgacagaagcggagagtgcagagcccacaagattatatatgctggacctgatc
attgccatggcaccgtatgcagatgaaccctccatgactaagatctatcacactattttg
ccatatttggaggataaaaatcacagtttgcagaagaaagcctatagagttttggaggaa
atatgtggaggggaacagccaccatgcaaagaatttgtaaacaacaatctggaagaatta
aagaaaacactcctgacttccctgaaaagcgcttcatcccctgctaaacggcctcgtttg
aaatgtctgatccatattgtgaaacaactggcagcggatcacgaagaatttataacttcc
cttattcctgaggtgatgatttgtacaagagaagtttccgtaggagcacgcaagaatgca
tacacgttactggcagagataggatacgctttcctgcgcttcaaccatgatcagaaagag
gctatggagcagtaccttgctgttgtctatgcaggactgactggttctgtcaccatgata
agctgcgcagtgctaacactaacaaggctcttgtttgaatttaaagatcaaatgggcctg
caggtgattgaacatttgctggagaatgtctgcctcctcttaggatccagaacacgggaa
gtggttaaagccgcgttgggcttcatcaaagttataatcttcattatggacataaaagtt
ctgtccaagcagctgcaaatgatgatggaagctataggaaatatcaacagtgacatgagg
cgcttcttccgcgtgaagcttaaaaacatcttcaccaagttcatacgaaagtttgggttt
gagttggtaaagtccatgttgcctgaagcttaccataaagtcctagtaaacatccgtaag
gctgaagccagaaataagaaacagaaagcattgaaacaggctgcagcagtgggagaggag
gacgatcaagaaaccaaaaaactggagggaaatagtatggaagacattttggctgattct
gatgaagaagtagaggaagatgaagagaaaccaaccaaacaacaaaagaaactggcccgg
cagaagagccaggcttggcttaaagaaggggaggaagatgaccctctaaatttccttgat
cccaaagctgcacagcgtgtactggctaccaggcccgacgggaagagcaccaagctaaag
cacgactttaagacctcgtcggatgggcgcctcattatccaagatgatgaagtagaagaa
gataagtctaaagccgttgatgaagaaatggcagatctcatgcaggaagtgggaattcga
agtaaaaaagctcaaaagaagagatttcgtgaagataatgatgatgatgatgatgccaca
gataaaaaaccacagtataaatctggcggctctggaatacacagaccaatctccaaaaag
ccagaaagtggagcaaactacaaatctaagaaaggaaaaggcgacgtgaaacagaaaggc
aagcatgatccgtttgcatatatacctctaaacaaagccacccttaaccgaaggaaaaaa
gcaaagatgcaaggccagtttaaaggcctggtgagagcggcacaaagaggggcacagagt
ggactgaaaaagagaaaagacaggaggctttaa
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integrated database retrieval system
