Xenopus tropicalis (tropical clawed frog): 447983
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Entry
447983 CDS
T01011
Symbol
ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
447983 (ssrp1)
03036 Chromosome and associated proteins [BR:
xtr03036
]
447983 (ssrp1)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
447983 (ssrp1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
447983 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
447983
NCBI-ProteinID:
NP_001184126
Xenbase:
XB-GENE-994294
UniProt:
A0A6I8RRM8
Q6GLF4
LinkDB
All DBs
Position
7:complement(56050121..56108744)
Genome browser
AA seq
695 aa
AA seq
DB search
MADTLEFNDIYQEVKGSMNDGRLRLSRAGLMYKNNKTGKVENISAADIAEVVWRRVALGH
GIKLLTNGGHVYKYDGFRDTEYDKLFDYFKSHFRVELVEKDLCVKGWNWGSVRFGGQLLS
FDIGDQPAFELPLSNVSQCTTGKNEVTLEFHQNDDSEVSLMEIRFYVPPTQDDGGDPVEA
FAQNVLSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDMTLTLNMSEEEVERRFEG
KLKKNMSGCLYEMVSRVMKALVNRKITVPGNFQGHSGSQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEVNCVNFARGTTTTRSFDFEIETKQGSQYTFSSIEREEYGKLFDFVNA
KKLSIKNRGLKEGMKPAYDDYADSDEDQHDAYLERMKEEGKIRENADSDESGDETDESFN
PGEEEDEVAEEFDSNPSASSSSADSDDDAEKKKEAKRAKIVKEKKPRKKKESKKTKDPSA
PKRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKSMSKDKKEEWDRRAEEAKRD
YEKAMKEYNSSTPTEASKKEKKAKGEKKKKAESSEKKKHVKASSPARAALKSNTDSFKSK
EFVSSDESSSDDSIQKKDSEEIASTPDSSAESGSD
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcggatactttggagttcaatgatatttatcaggaagtgaaaggttctatgaatgat
ggtcgcttgcgcttgtcccgtgctggccttatgtacaagaacaacaagactggaaaggtg
gagaacatttctgctgcagatattgcagaagtagtatggagacgtgttgcccttggacat
ggcataaaactgctcacaaatggaggacatgtgtataaatatgatggctttcgtgataca
gagtatgacaagctgtttgattatttcaaatctcattttcgtgtggaattagtagagaag
gatttgtgtgtgaaaggatggaactggggcagtgtgagatttggaggacagctgctttcg
tttgatataggagatcagccagcctttgaacttccacttagtaatgtttctcagtgtacc
acagggaagaatgaggtgacacttgaatttcatcagaatgatgactctgaggtctctctc
atggagatacgtttctatgtccctcccacacaggacgatggaggggaccctgtagaggca
tttgctcaaaatgttctctctaaagcagatgttatccaggctacaggtgatgcagtttgt
atattccgtgaactccagtgtcttactccacgtggacgttatgatatacgtatatatcct
acctttctccacttgcatggaaaaacgttcgactacaaaattccatacactacagtgttg
cgccttttcttgctgccacacaaggaccaaagacaaatgttctttgtaattagcttggac
ccacctataaagcaggggcagacacgttatcactttctgattctgctcttctcaaaagat
gaggacatgactttgacactcaacatgagcgaggaagaggttgagaggcgttttgaggga
aagcttaaaaagaatatgtcaggctgtctttatgagatggtcagtcgtgttatgaaggct
ttggtaaaccgcaagataactgtcccaggaaattttcagggccactctggatcacagtgc
attacatgttcatacaaggccagttcagggttgctctatccattggaacgtggctttatc
tatgttcataaaccacctgtgcacataagatttgatgaagtcaactgtgtcaactttgcc
cgtggtaccacaactacacgctcatttgacttcgagatagaaacaaaacaaggttcacag
tatactttcagcagcattgaaagggaggaatacggaaagctgtttgattttgtgaacgct
aaaaaactaagtattaaaaatagaggactaaaagagggtatgaaaccagcatatgatgat
tatgcagactctgatgaagatcaacatgatgcttatctagaaagaatgaaagaggagggg
aagattcgtgagaatgcagatagcgatgagtctggtgacgaaactgatgaatcatttaac
ccaggagaggaagaagatgaagttgctgaagagtttgatagtaatccctctgcaagctcc
tctagtgctgacagtgatgatgatgcagagaaaaaaaaagaagctaaaagagctaaaatt
gtgaaagagaagaaaccaagaaaaaaaaaagagtcaaaaaaaaccaaagacccaagtgct
ccaaagcgccccatgtctgcctatatgctgtggttaaatgcgagtcgggagaagattaaa
agtgaaaatccagggatcagcataactgacctatccaagaaagcaggggaaatttggaag
agcatgagcaaagataaaaaagaggagtgggaccgaagagcagaagaagccaagagggat
tatgaaaaagctatgaaagagtacaattcaagtacacctactgaggcatcaaaaaaggaa
aaaaaagcaaaaggagaaaaaaaaaaaaaagcagagtcatcagagaagaaaaagcatgtg
aaagcatcatcaccagccagagcagcactaaaatcgaacactgacagcttcaaaagcaaa
gagtttgtgtccagtgatgaaagttcttctgacgacagcatacagaagaaagattcggag
gaaattgccagcaccccggatagctcagctgaatcgggttcagattaa
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