Xenopus tropicalis (tropical clawed frog): 447984
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Entry
447984 CDS
T01011
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
447984 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
447984 (taf3)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
447984 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
447984
NCBI-ProteinID:
XP_004913100
Xenbase:
XB-GENE-940280
UniProt:
F6XEQ6
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All DBs
Position
3:complement(83683096..83743733)
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AA seq
929 aa
AA seq
DB search
MCESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTD
PVLDDVGQAFKLMGVNIHELEDYIHNIEPVTFPHQIPSFPVSKNNALQFPPPGSKDAEDR
KEYIPDYLPLIISAQEEEEEEQVPTDGGTSAEAMQVPLDEEGEEGEGEMEDEETVNDENY
LSKRPLDSPETMEMPFAKRARLMNNKGDILDGSLEPREPLSSINSQKVPSVLSPAHKLDS
QDLDVSSSDQIMLSPVSKSQAPPPKPSESKSLISKTKSKGGSPGQKIKSPKATPISSVLG
SPIRSPKSGPKERKSPGRAKSPKSPKSPKVPLSTPPPALKIEIPNRTPLATLSEKIVREN
IQIKQNQTPLDSDKLNVEIPSKKPSIADNTIEDSIDAVIARACAEQEPDPFEFSSGSESE
GEVFTSPKRLTISEPTTPKLSASGINLGKTSSTPIPASVGTSSSDISWTMDDSINEVIRK
VSQETPTNTPANNPPCFSSPSASPPTPEPLLKTYEDKAKLPSPIEPKKKTKKEQRAKKKK
DKDKLKDKDKERSKDKNKDKTKDKEKDKEKDGSKDGKVLWKDSIKDEDSELHRFKLKEFN
EIDSKSKQKENCGKKDKEKHKDKKKDKEKGKKDKDKKEKGKDKTKEEKIKSPSTPIMLSS
KDIALPMISTPNAVRLPSLLPTLSPLLPEKLFEEKEKPKEKDKKKDKKEKKKKKDKEKVK
EKEKEKKEKEKEKDKKEKEKHKHEKQVKAELSIPAASPVIPRLTLRVGAGQDTIVISKVV
SAPESKAAPPPSLPKSPPPTPSPAPAPILVVPPQAPPAPAAASPAPTPAPSALTSNAGSS
KTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKADDGSPMIGCDLCDDWYHWPCVGINAA
PPEDEQWFCTKCESKKKDKKHKKRKHKAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctactcacgctcgctgttgcgggtgtcggtggcgcaaatctgccaagct
ctgggatgggattctgtacaggttaccgcctgcgacctgctcaccgatgtgctgcaaaga
tatctgcagcaactgtgccgtggagctcaccgctattccgaactgtatggacgtacagat
ccagttttggacgacgttggtcaagccttcaagctgatgggagtaaatattcatgaacta
gaagactatatacacaatatagaaccagtgactttccctcatcagatcccttccttccct
gtcagtaagaataatgcacttcagttccctcctcctggaagcaaggatgcagaagacaga
aaagaatacatccctgattacttacctcttatcatctctgcacaggaagaggaagaagaa
gagcaggtgcccacagatggaggaacatcagcagaagctatgcaggttccccttgatgaa
gaaggagaagaaggagaaggagagatggaagatgaagagactgtcaatgatgaaaattat
ttaagtaaaaggccacttgatagtccagaaactatggaaatgccttttgcaaaacgagca
agattaatgaataataaaggtgatattttagatggctctttagaacctcgagaaccactt
agttcaataaactctcagaaagtcccatctgtgctttcccctgctcataaactagacagt
caagacctagatgtctcttcttctgaccaaataatgttaagtcctgtttcaaaatcccag
gctcctccacccaaacccagtgaatcaaagtctttgatttcaaaaactaaatcaaaaggt
ggttctccaggacaaaaaataaagtctccaaaagcaacccctatttcatctgttcttggc
agtccaatacgttcaccaaaaagtggaccaaaagagagaaaatctcctggacgtgccaaa
agccccaagagtcctaagagtccaaaagttcctttgtctactccaccacctgctttaaaa
atagaaattccaaatcggactccattagctactttaagtgaaaaaattgtcagagagaat
atacagataaagcaaaatcaaacaccacttgattctgacaagttaaatgtggaaatcccc
tcaaagaaaccatcaatagctgataataccattgaagattcaattgatgcagtaattgct
cgtgcttgtgcagagcaagaacctgatccttttgaattttcatcaggctcagaatctgag
ggtgaagtttttactagccctaaaagacttactatttcagagcccaccacacctaagctt
tcggcatctggcatcaatcttgggaaaacatcaagtactccaatacctgcttctgtgggg
acttctagctctgacatttcatggacaatggatgactctatcaacgaagtgattagaaag
gtcagccaagaaaccccaacaaatacacctgccaataatcctccatgtttctcctcgcct
tctgcttcaccccctactccagaaccacttttaaagacttatgaagacaaggctaaattg
ccatctcctattgaaccaaaaaaaaagacaaaaaaagaacagagagcgaaaaagaagaaa
gacaaggacaagctaaaggataaagacaaagaaaggagtaaagacaaaaacaaagataaa
actaaggacaaggaaaaagataaagaaaaggatggtagcaaagatggaaaagttttatgg
aaggactccattaaagatgaggattctgagctgcacagatttaaacttaaagaatttaat
gaaattgactctaaatccaagcagaaagaaaactgtggaaagaaagacaaagagaaacat
aaggataaaaagaaagataaggaaaaggggaagaaggataaagacaagaaagaaaaagga
aaggataagaccaaggaagaaaaaattaaatctccatctacacctattatgttatcatct
aaggacattgcattgcccatgataagtactccaaatgcagtcagactgccgtcattgctg
cccactttgtcccctcttcttccggagaaattatttgaagagaaggaaaagcccaaagag
aaggacaaaaagaaagacaagaaggaaaaaaagaagaagaaagacaaagagaaagtgaag
gaaaaagaaaaggagaagaaagaaaaggaaaaagagaaggataagaaggaaaaagaaaaa
cataagcatgagaagcaggtcaaagcagaattgtctattcctgctgcttctcctgtaatc
cccagactaactctgagagtgggtgccggacaagacacaattgttatcagcaaagtcgta
tctgctccagagtctaaagcagcccctccaccatcgttgcccaaatctccacctccaaca
ccttctccagctccagcacctattcttgttgtcccccctcaagctccaccagctccagca
gctgcatcaccagctccaactccagccccttctgcactcacttcaaatgctggttcctct
aaaacccctgtccgaagtgttgtgacagaaacagtcagtacctatgtgatccgagatgag
tggggcaaccagatttggatctgtcccggatgtaacaaagcagatgatggcagcccaatg
attggttgtgatctatgtgatgactggtaccactggccatgtgttggaataaatgcagcc
ccaccagaagatgaacagtggttctgtaccaagtgtgaaagcaagaagaaggataaaaag
cacaagaaaagaaagcacaaagctcactga
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