Xenopus tropicalis (tropical clawed frog): 447999
Help
Entry
447999 CDS
T01011
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
447999 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
447999 (snrpd1)
03032 DNA replication proteins [BR:
xtr03032
]
447999 (snrpd1)
Spliceosome [BR:
xtr03041
]
Complex A
U1 snRNP components
Sm proteins
447999 (snrpd1)
U2 snRNP components
447999 (snrpd1)
Complex B
U1 snRNP components
447999 (snrpd1)
U4/U6.U5 tri-snRNP components
447999 (snrpd1)
Complex C
U2 snRNP components
447999 (snrpd1)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
447999 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
YomU_Tube
Hfq
AAA_RNF213_3
Gemin7
SM-ATX
Phage_Hfq
API5
Motif
Other DBs
NCBI-GeneID:
447999
NCBI-ProteinID:
NP_001004780
Xenbase:
XB-GENE-5789948
UniProt:
A0A8J0PCV0
Q6GLH6
LinkDB
All DBs
Position
6:complement(65066116..65072836)
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTVELKNGTQVHGTITGVDVSMNTHLKAVKMTVKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagttaggtttttgatgaaattaagtcatgaaactgtcacagtggaacttaag
aacggaacccaagtgcatggcacgatcacaggagtagatgtgagcatgaatacgcatttg
aaagccgttaaaatgacagtgaagaatagagagcctgttcaattggaaacattaagtatt
cgaggaaataatattcgttacttcattctaccagacagtttgcctcttgacacgttactt
gttgatgtggagccaaaagttaagtcaaagaagagggaggctgttgctggcagaggaaga
gggagaggccgtggtagaggccgagggcgaggaagaggtagaggaggcccaagaagataa
DBGET
integrated database retrieval system
