KEGG   Xenopus tropicalis (tropical clawed frog): 448002
Entry
448002            CDS       T01011                                 
Symbol
sf3a2
Name
(RefSeq) splicing factor 3A subunit 2
  KO
K12826  splicing factor 3A subunit 2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    448002 (sf3a2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    448002 (sf3a2)
Spliceosome [BR:xtr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    448002 (sf3a2)
 Complex B
    448002 (sf3a2)
 Complex C
   U2 SnRNP specific factors
    448002 (sf3a2)
SSDB
Motif
Pfam: SF3A2 zf-met CactinC_cactus PRP4
Other DBs
NCBI-GeneID: 448002
NCBI-ProteinID: NP_001004782
Xenbase: XB-GENE-492856
UniProt: Q6GLH3
LinkDB
Position
1:complement(102623687..102633624)
AA seq 412 aa
MDFQHRAGGKTGSGGVASASESNRDRRERLRQLALETIDINKDPYFMKNHLGSYECKLCL
TLHNNEGSYLAHTQGKKHQTNLARRAAKEAKEAPAQPAPEKVKVEVKKFVKIGRPGYKVT
KQRDPEMAQQSLLFQIDYPEIAEGIMPRHRFMSAYEQRIEPPDRRWQYLLMAAEPYETIA
FKVPSREIDKVEGKFWTHWNRETKQFFLQFHFKMEKPPQAPTLPPAPPGVKRPVPPAING
IQARPPMPENMPPPPPGGLPMPPMPPGTPAPPVPPPQLPPAPVVPPPGVHPPVPPPSLPP
PGVPPPGVPPPPNPAVPPPGVPPPGIPPPGIPPPGVPPPPAPGVPPPPAPGVPLPPTPGV
PPPPAPGVPPPPAPGVPPPAPGVLPPGPMPPMMRPPLPSDGPTNIPPPPPTN
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggatttccaacacagagccggaggaaagaccggcagcggaggggtggcttctgcatct
gaaagtaacagagacagaagggagcgactcagacaacttgctttggaaactattgacatt
aataaggatccatactttatgaaaaaccaccttggctcttacgaatgcaagctttgcctc
accctacataataatgaggggagttatctggctcatacacaaggaaaaaagcatcagaca
aatttagctcgccgagcggccaaagaagcaaaggaagcaccagcacaacctgccccagaa
aaagtaaaggtagaagtgaagaaatttgtcaaaattggtcgacctggatacaaggtgact
aagcagagagatccagaaatggcccagcagtctttgttgtttcagattgactatcctgag
atagctgaaggtatcatgccccgacaccgctttatgtctgcatacgaacagaggattgag
cccccagacagacgatggcagtacctgctgatggctgcagagccctatgaaactattgct
tttaaggtcccaagtcgagaaatagacaaagtggagggaaagttttggacacattggaac
agagagacaaaacagtttttcctacagttccactttaagatggagaagcctccacaagca
cccactttgcctccagcaccacctggtgttaaaagacctgttcctccagccatcaatggg
atacaagcacgtcctccaatgcctgagaatatgccgcctcctcctccaggaggactgcct
atgcccccaatgccacctgggacacctgcacctcctgtaccgccaccacagcttccacct
gccccagttgttcctcctcctggggtgcaccctcctgtgcccccaccttctcttcctcct
cctggcgtaccaccacctggtgtaccaccacctcctaatcctgctgtgcctccacctggt
gttccacctccaggcattcctcctccaggcattcctcctcctggtgtacccccaccacct
gccccaggagtgcctccgccccctgcacctggtgtgccactccctccaacgccaggggtt
ccacctcctcctgccccaggggtacctcctccaccagcgccaggtgtaccacctccagca
cctggtgttctcccacctggccctatgcctccaatgatgaggccacctttacctagcgat
ggaccaacaaatattcctccaccccctcccaccaactga

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