Xenopus tropicalis (tropical clawed frog): 448003
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Entry
448003 CDS
T01011
Symbol
srsf5
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
448003 (srsf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
448003 (srsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
448003 (srsf5)
Spliceosome [BR:
xtr03041
]
Common components
Common spliceosomal components
SR proteins
448003 (srsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
448003
NCBI-ProteinID:
NP_001004783
Xenbase:
XB-GENE-487049
UniProt:
Q6DK94
LinkDB
All DBs
Position
8:complement(107692647..107697266)
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AA seq
272 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGK
ELCNERVTIEHARLRSRGGPRGLGRGRYNDRFSSRRPRGDRSAPPIRTENRLIVENLSSR
VSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIE
GNKRHSRSRSRSRSRSRSSSRSRSRSRSRSRKSYSRSRSRSRTPRSNRSKSRSVSRSPVP
EKSQKSRSPSKSPASVDRQKSRSRSRSADSRN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgcagagtatttattggcaggcttaacccagctgccagggagaaagacgta
gagcgattcttcaagggctatggacgtatacgagatattgacttgaaaagaggttttgga
tttgtggagtttgatgatcccagagatgcagatgatgcagtttatgagcttgatggcaaa
gagctgtgtaatgagagagttacaattgaacacgctcgtcttcgttctcgaggtggtcca
aggggtcttggcaggggaagatacaacgaccgtttcagtagtcgtcgaccacgaggcgat
agaagtgctccacccataaggactgagaaccggcttatagtagaaaatctgtcgtcaaga
gtcagctggcaggatttgaaagatttcatgagacaagccggagaagttacatttgcagat
gcgcacagaccaaagcttaatgaaggggttgttgaatttgcatcttacagtgatttaaaa
aatgccattgagaagctttctgggaaggagataaatggcagaaaaataaaactgattgaa
gggaataaaagacacagccgatcaaggagcagatcacgctcccgcagcagaagttcatcc
aggtcccgaagccgctcccgctccagaagccgaaagtcttacagccggtctcgtagccgc
agccgcactccccgcagcaaccgtagcaaatccaggtctgtgagtaggtcacctgttcca
gagaaaagccagaaatcaagaagcccatcaaaatcacctgcatcagtcgatagacagaaa
tctcgatccagatctcggtctgctgatagccgaaactga
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integrated database retrieval system
