Xenopus tropicalis (tropical clawed frog): 448007
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Entry
448007 CDS
T01011
Symbol
rab1a
Name
(RefSeq) ras-related protein Rab-1A
KO
K07874
Ras-related protein Rab-1A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
448007 (rab1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448007 (rab1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
448007 (rab1a)
04031 GTP-binding proteins [BR:
xtr04031
]
448007 (rab1a)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
448007 (rab1a)
Autophagy
Other autophagy associated proteins
448007 (rab1a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
448007 (rab1a)
Exosomal proteins of other body fluids (saliva and urine)
448007 (rab1a)
Exosomal proteins of colorectal cancer cells
448007 (rab1a)
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
448007 (rab1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
FeoB_N
AAA
ABC_tran
AAA_7
PduV-EutP
AAA_16
LANC_like
AAA_29
Septin
AAA_22
AAA_5
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
448007
NCBI-ProteinID:
NP_001004787
Xenbase:
XB-GENE-485527
UniProt:
Q6GLH0
LinkDB
All DBs
Position
5:32031993..32055003
Genome browser
AA seq
204 aa
AA seq
DB search
MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
TAGGQEKNVKIQSTPVKQSSGGCC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgaatcccgagtatgactatttattcaaattgctcttgattggagactcc
ggtgtgggaaagtcttgtcttctgcttaggtttgcagatgacacatacacagaaagttac
atcagtacaattggtgttgattttaaaatcaggactatagagttagatgggaaaacaatc
aaacttcaaatttgggatactgccggccaggaaagatttcgaactattacatcaagttac
tacaggggagcccatggcatcattgttgtgtatgacgtaacagaccaggaatcctttaac
aatgtaaagcagtggcttcaggaaatagatcgctatgccagtgaaaatgttaacaagtta
ttggtaggcaacaaatgtgatctaacaacaaagaaagtcgtggactacacaacagcaaag
gagtttgcagactctctgggaattccatttttggaaacaagtgcaaagaacgcgacaaat
gtagagcaggcctttatgacaatggcagcggagatcaaaaagcgaatgggtcctggcgcc
acagcaggcggtcaagagaagaatgtcaaaatccagagcactccagtcaagcagtctagt
ggaggatgctgctaa
DBGET
integrated database retrieval system
