Xenopus tropicalis (tropical clawed frog): 448038
Help
Entry
448038 CDS
T01011
Symbol
mkrn2
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-2
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
448038 (mkrn2)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
448038 (mkrn2)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
448038 (mkrn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf-CCCH_4
zf_CCCH_4
Torus
zf-CCCH_2
zf-RING_UBOX
zf-CCCH_3
zf-C3HC4
MKRN1_C
zf-RING_5
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
448038
NCBI-ProteinID:
NP_001005447
Xenbase:
XB-GENE-5879487
UniProt:
Q6GLD9
LinkDB
All DBs
Position
4:complement(153475375..153480873)
Genome browser
AA seq
418 aa
AA seq
DB search
MNTKHVTCRYFLHGVCREGGRCLFSHDLATSKPSTVCRFYQRGQCAYGARCRYDHVKPCN
GSVFYPPQEMAPAPLESTPPLLPTQEAAAPVTKSAPQRREKKSVVLRDRDLCGASVEKAH
PDPALRPGCAADPPVSELEAKPHSYLEAICTGLDETPIPSAYPDAPQQLCPFAQAGGCHY
GESCPYIHGNVCEICGLQVLHPYDQEQRGHHEKLCMANFERDMERAFAFQASEGKVCSIC
MERVYDKQSPSERRFGILSNCHHTYCLACIRQWRCARQFENPVIKSCPECRVISEFVIPS
AYWVEDQSKKFELIEAFKQGMGKKACKYFDQGRGTCPFGGKCLYLHAYPDGTRAEPEKPR
KQLGSEGTVRFLNSVRLWDFIEEREQRNLPDAEDEVAELGELFMHLSGVGEEPPAASN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaaacatgtgacgtgcaggtatttcctacacggtgtgtgcagggaggggggc
cgctgcctcttctctcatgacttggccacaagcaaaccctccactgtctgccgcttctac
cagaggggccagtgtgcgtacggagcccgctgcaggtatgatcatgtcaagccgtgtaac
ggatccgtgttttaccctccccaagagatggcgccggcgccgttagagagcacccctcca
ttactccccacacaggaagctgcggcgcccgtcacaaaaagtgccccccagaggcgtgag
aagaaatccgttgtacttagggaccgtgatctgtgcggcgcctccgtggaaaaggctcat
cccgatcctgcactccggcccggctgcgccgctgaccccccagtcagtgagttggaggcc
aaaccccattcgtacctggaagccatctgcaccggactggatgagaccccaatccccagc
gcctatcctgatgccccccagcagttgtgcccttttgcccaggccggtggctgtcactat
ggcgagagctgcccctatatccatggcaacgtgtgcgagatctgcggcctccaggtcctg
catccgtacgaccaggagcagagggggcaccacgagaagctgtgcatggccaacttcgag
cgggacatggagagagcgtttgccttccaggccagcgagggcaaggtgtgcagcatctgc
atggagcgcgtctacgacaaacagtcgccctccgagcggcgcttcggcatcctctccaac
tgccaccacacctactgcctggcatgtatccgccagtggagatgtgcccgccagttcgag
aatcctgtcatcaagtcgtgcccagagtgccgcgtcatctccgagttcgtcatccccagc
gcctattgggttgaagaccaaagcaagaagtttgagctgattgaggcctttaagcaggga
atggggaaaaaagcctgtaaatactttgatcaggggcggggaacgtgcccatttgggggc
aaatgcctttacttacacgcctaccctgatgggacgagggcagaacctgagaaaccacgg
aagcagcttgggtccgaaggcaccgtgaggtttctcaattcggtgcggctgtgggacttc
attgaggagcgggagcagcggaacctccctgatgcagaggatgaggtggcggaactgggg
gagctctttatgcacctgtccggagtcggtgaggaaccccccgcagcctctaactga
DBGET
integrated database retrieval system
