Xenopus tropicalis (tropical clawed frog): 448049
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Entry
448049 CDS
T01011
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
448049 (fmr1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
448049 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
448049 (fmr1)
mRNA cycle factors
Stress granule specific factors
448049 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMR_C2
FXMRP1_C_core
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
KIF2A-like_1st
Motif
Other DBs
NCBI-GeneID:
448049
NCBI-ProteinID:
NP_001005454
Xenbase:
XB-GENE-977113
UniProt:
Q6GLC9
LinkDB
All DBs
Position
8:56990711..57010718
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AA seq
590 aa
AA seq
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MEELAVEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDVRFPPPSGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVGAFSVSYDSENYQLVILSVNEVTIKR
ANMLSDMHFRSLRTKLSLMLRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENDKNISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKE
VDQLRLERLQIDEQLRQIGASSRPPPNRPDKEKGYQSEDLSGTGRGSRPYNNRGRSRRGT
GYASDIRYGDPDYRKTTYPEYPRSQAFWIKGTNSEASNASETESDHRDELSDWSLAPAED
DRDNYHRRGDGRRRGGPRGQGMRGRGGFKGNDDQPRPDNRQRNSRETKARTSDGSLQIRI
DCNNERSVHTKTLQNASVEGSRLRTGKDRVQKKEKSEVVDGPQVVVNGIP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggccgtggaggtgcggggctccaatggagccttctacaaggcatttgtg
aaggatgtacatgaggattctataactgtcacttttgaaaacaactggcagcaagagaga
caaatcccattccatgatgtaagatttccacctccatcagggtataataaggatataaat
gaaagtgatgaggtagaggtgtattccagagcaaatgaaaaagagccatgctgctggtgg
cttgctaaagttagaatgataaagggtgagttttatgttatagaatatgcagcttgtgat
gcaacttacaatgagatagtcactatagaacggctgcgatctgttaatcccaacaagccg
gcaacaaaaaactcatttcacaaggttaaactggacgttccagaagatctaaggcaaatg
tgtgcaaaagattcagcgcataaagattttaaaaaggctgttggtgcattttcagtatcg
tacgattcagaaaactaccagcttgtcattctgtctgttaatgaagtaactataaaaagg
gcaaacatgctgagtgacatgcatttccgaagccttcgtaccaaactgtcacttatgttg
agaaatgaagaagccagcaaacagcttgaaagttctaggcagttggcatccagatttcat
gagcagttcatagtacgagaagatctgatggggcttgctattggtactcatggtgccaac
atacagcaggctaggaaggttcctggggtaactgcaattgatcttgatgaagacacatgc
acatttcatatttatggagaggaccaagaagctgttaagaaagccaggacctacctggaa
tttgcagaagatgttatacaagtcccacggaatttagtaggcaaagtcattgggaaaaat
ggaaagctcattcaggaaattgtggataaatctggtgttgttcgagtccgaattgaagca
gaaaatgataagaatatttccccggaagagggtatggttccttttgtgtttgtggggaca
aaggacagcatcaccaatgcaactgttttattggattaccaccttaattatttaaaggaa
gtggaccaactgcgcttagaacggttacaaattgatgagcaacttcgacaaattggagct
agctcaaggcctccacctaatcggcctgataaggagaagggatatcagagtgaagacctt
agtggcactgggagaggaagcagaccttacaataacagaggccgcagtcgaaggggcaca
ggttatgcctctgacataaggtatggagatccagattacagaaagaccacttatccggaa
taccccaggtcccaagcattctggataaaaggcacaaattcagaagcatcaaatgcctca
gagacagaatcagaccaccgagatgagctcagtgattggtcattggctccagctgaggat
gacagagataattatcatcgaaggggggatggacgcagacgagggggacctcgaggtcaa
ggcatgagaggtcgtggaggatttaaaggaaacgatgaccaaccacgaccggacaacagg
caacgcaattcaagggagacaaaagcaaggacatcagatggctctttacagatccgtatt
gactgcaataatgaaaggagtgtacatactaaaaccctgcaaaacgcatctgttgaaggc
agccgactgcgcactggcaaagaccgcgttcaaaagaaagagaagagcgaagtggtggac
ggaccacaagtggtggttaatggcataccataa
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