Xenopus tropicalis (tropical clawed frog): 448085
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Entry
448085 CDS
T01011
Symbol
abce1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
448085 (abce1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
448085 (abce1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
AAA_22
Fer4
AAA
AAA_16
AAA_15
AAA_29
RsgA_GTPase
VapE-like_dom
AAA_30
Fer4_6
NACHT
nSTAND3
Fer4_2
Fer4_10
AAA_23
SRP54
Fer4_21
TsaE
ORC-CDC6-like
AAA_24
NPHP3_N
Fer4_4
AAA_19
TniB
Fer4_16
AAA_5
Fer4_9
Fer4_7
Motif
Other DBs
NCBI-GeneID:
448085
NCBI-ProteinID:
NP_001005628
Xenbase:
XB-GENE-993988
UniProt:
Q6GL91
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All DBs
Position
1:59057219..59073887
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AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIVWISETLCIGCGI
CIKKCPFVALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKHDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGPVGTILDRKDETKTQKSVCDQLDLTHLRDRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDTSLVFKVAETANEEDIKKMCMYKYPSMRKLLGEF
QLRIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKS
SGTVRQLLHEKIRDAYTHPQFVTDVMKPMQIESIIDQEVQSLSGGELQRVALTLCLGKAA
DVYLIDEPSAYLDSEQRLTAARVIKRFILHAKRTAFIVEHDFIMATYLADRVIVFDGIPS
KDTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKMNSIKDVDQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaactaacgagaatagctattgtcaatcatgacaaatgcaagccaaagaaa
tgtcgtcaagaatgcaaaaagagttgccctgttgtaaggatgggaaaattgtgcattgaa
gtgactccacaaagtaaaattgtatggatatccgaaaccttgtgcattggatgtggtatc
tgtatcaagaaatgtccctttgtagcattgtcaattgtcaacttgccgagcaatctggag
aaggaaacaacccacagatattgtgccaatgcctttaaacttcacaggttgcctattccc
cgacctggagaagtacttgggttggttggtacaaatggtatcggaaaatctacagcattg
aaaattttggctggaaagcagaagccaaaccttggaaagcatgatgatcctccagactgg
caggagatcttgacctatttcagggggtcagagttgcagaattacttcaccaaaattttg
gaggatgacctgaaggccatcattaaacctcagtatgtggaccaaattccaaaagctgca
aagggacctgtgggtaccatattggatagaaaagatgagacaaagacacagaaatctgta
tgtgatcaactagaccttactcatctgagagacagaaacgtggaggatctttctggggga
gagctacagaggtttgcttgtgcggttgtctgtatccagagagcagacatttttatgttt
gacgagccatctagttatttagatgtcaagcaacgcctcaaggctgctattaccatcaga
tctctgattaatccagatcgctacatcattgttgtggaacatgacctcagtgtgttggat
tatctctccgactttatttgctgcttgtatggcgtcccaagtgcatatggtgtggtaacc
atgccgttcagtgtcagagaaggcataaacattttcttggatggctacgttcctactgaa
aacttaaggttcagagacacttctctggtttttaaagtggctgagactgccaatgaagaa
gatatcaagaaaatgtgcatgtacaagtacccctccatgaggaagttgttgggagagttc
caactgaggattgtcgctggggagtttacagactctgaaatcatggtcatgcttggagag
aatgggaccggaaaaaccacctttatccgaatgcttgctgggaggctaaaacctgatgaa
gggggtgaagtgcccgttcttaatgtgagttataaaccgcagaagatcagccccaaatca
tcaggaactgttcgccagttgctgcatgagaagatcagagatgcctacactcatccacag
tttgtgacagatgtgatgaagccaatgcagattgaaagtataatagatcaagaggtgcag
tctttgtccggtggtgagttacagagggtggccttaactctatgtttaggtaaagctgcg
gatgtgtatctaattgacgagccatcagcatatctggattctgaacagcgtctcacagcc
gccagagtaatcaaaagattcattctccacgccaagaggacggcttttattgttgagcac
gattttataatggcgacttatcttgctgacagagtcattgtgtttgatggtataccttcc
aaagatactgttgctaacagccctcaaacactattggctggcatgaacaagttcttgtca
cagctggaaatcacgtttaggagagatcctaacaactacagaccaagaataaacaaaatg
aattctattaaggatgtggatcagaagaagagtggcaactactttttcttagacgactaa
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