Xenopus tropicalis (tropical clawed frog): 448156
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Entry
448156 CDS
T01011
Symbol
nectin2
Name
(RefSeq) nectin-2 precursor
KO
K06081
poliovirus receptor-related protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03266
Virion - Herpesvirus
xtr04514
Cell adhesion molecule (CAM) interaction
xtr04517
IgSF CAM signaling
xtr04520
Adherens junction
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
448156 (nectin2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
448156 (nectin2)
04517 IgSF CAM signaling
448156 (nectin2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
448156 (nectin2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
448156 (nectin2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
448156 (nectin2)
04090 CD molecules [BR:
xtr04090
]
448156 (nectin2)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Nectin family
448156 (nectin2)
CD molecules [BR:
xtr04090
]
Proteins
448156 (nectin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
C2-set_2
I-set
V-set
Ig_2
ig
TM_ErbB1
C2-set_3
Izumo-Ig
Syndecan
T4SS_pilin
Lep_receptor_Ig
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
448156
NCBI-ProteinID:
NP_001004860
Xenbase:
XB-GENE-947429
UniProt:
Q6GL25
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All DBs
Position
7:109200442..109232049
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AA seq
464 aa
AA seq
DB search
MYRLCSVLLLLCPVLQAQEINVNEKVTGTLGQQITLPCTFNNNGVDMQVTQIMWMKDSTN
LATYSPQFGIHVQNKNDFNLTASPSSATLLIKLLRASDEGNYICEVTTFPGGNRRGITYL
SVKAEPRNSAEALPVIAGDIEVPVAKCASANGRPPSQITWRSTLPGNFDTTMNNNTDGTY
TVVSNYKLVPTWTADKQEVICIISYDSKESVIPITLSIQYSPIVTIEGYDNNWYLKRLGA
SLTCNAHGNPQPTVYTWKTADGSPLPNTVKAKDNVLYVDEVDERVNTTIVCEVTNALGSR
ASQQEVLVRERALENQTNNAGAIAGGVIGGVLVLLLLAAVIFILIRRGGVHKKERGSYNP
KPRIFGSGKPSQEFTYQDDSEMGKPLKASGPLRDSGLSPSLAEEEEDESEERMKYNVLED
DDEEEKFNEVGPMLQLRPHHDPYLDDDMESQTDGSIISRTAVYV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcctttgctctgttctgttgctgctgtgcccagttttgcaggcacaggagata
aatgtcaacgagaaggtaactggcaccttggggcagcaaataactctgccctgcacattt
aacaacaatggtgttgatatgcaagtgactcagataatgtggatgaaagatagcacaaac
cttgctacctacagcccccagtttggcatccatgtgcagaacaagaatgatttcaatctg
actgccagcccaagcagtgccacgctccttatcaagttgctgcgggcttctgatgaagga
aactatatctgtgaggtcaccacctttccaggcggcaaccgtaggggcattacatatctc
agtgtgaaagctgaaccaagaaactcagctgaagctcttcctgtaattgccggcgacata
gaggttccggtggcaaaatgtgcatcagccaatggcaggcctccatcccagatcacttgg
agatcaacactcccaggcaattttgataccactatgaataataacacagatggtacatac
acggtggtcagcaactacaagctcgtcccaacctggactgctgacaagcaagaagtcatc
tgcattatttcctacgattccaaggagtctgtgattcccatcaccctgtccatacaatac
agcccaattgtcactattgaaggatacgataacaactggtatctgaaacggctcggggcc
tcgcttacctgtaatgctcacgggaacccccaacctacagtatacacctggaaaacggcc
gacggctcgccgctccctaacacggtgaaagctaaagataatgtgctgtatgtggatgaa
gtggacgagcgagtgaatacgaccatagtctgcgaggtgacaaatgcccttgggagccga
gcatcccaacaggaggtgctagtgagagaacgtgcgctcgagaaccagacaaacaacgca
ggagccattgccgggggtgtcattgggggggtcctggtcctgctccttctagcagccgtc
atcttcatcctcatccggaggggaggggtgcacaagaaagaacggggatcctacaacccc
aaacccagaatcttcggcagcgggaaaccctcccaggaatttacttaccaggacgactca
gagatgggcaaacctcttaaagcttctggtccattgagagacagtgggttgagcccttcg
ctggcagaggaagaggaggatgaatccgaagagaggatgaaatacaatgttttagaggac
gacgacgaagaagagaaattcaacgaggtggggcccatgctgcaacttagacctcaccac
gacccctacctggacgatgacatggagtctcagactgacggctctatcatctccaggact
gcagtgtatgtgtaa
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