Xenopus tropicalis (tropical clawed frog): 448156
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Entry
448156 CDS
T01011
Symbol
nectin2
Name
(RefSeq) nectin-2 precursor
KO
K06081
poliovirus receptor-related protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03266
Virion - Herpesvirus
xtr04514
Cell adhesion molecules
xtr04520
Adherens junction
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
448156 (nectin2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
448156 (nectin2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
448156 (nectin2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
448156 (nectin2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
448156 (nectin2)
04090 CD molecules [BR:
xtr04090
]
448156 (nectin2)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Nectin family
448156 (nectin2)
CD molecules [BR:
xtr04090
]
Proteins
448156 (nectin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
V-set
I-set
ig
Ig_2
TM_ErbB1
Izumo-Ig
Syndecan
Lep_receptor_Ig
Motif
Other DBs
NCBI-GeneID:
448156
NCBI-ProteinID:
NP_001004860
Xenbase:
XB-GENE-947429
UniProt:
Q6GL25
LinkDB
All DBs
Position
7:109200442..109232049
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AA seq
464 aa
AA seq
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MYRLCSVLLLLCPVLQAQEINVNEKVTGTLGQQITLPCTFNNNGVDMQVTQIMWMKDSTN
LATYSPQFGIHVQNKNDFNLTASPSSATLLIKLLRASDEGNYICEVTTFPGGNRRGITYL
SVKAEPRNSAEALPVIAGDIEVPVAKCASANGRPPSQITWRSTLPGNFDTTMNNNTDGTY
TVVSNYKLVPTWTADKQEVICIISYDSKESVIPITLSIQYSPIVTIEGYDNNWYLKRLGA
SLTCNAHGNPQPTVYTWKTADGSPLPNTVKAKDNVLYVDEVDERVNTTIVCEVTNALGSR
ASQQEVLVRERALENQTNNAGAIAGGVIGGVLVLLLLAAVIFILIRRGGVHKKERGSYNP
KPRIFGSGKPSQEFTYQDDSEMGKPLKASGPLRDSGLSPSLAEEEEDESEERMKYNVLED
DDEEEKFNEVGPMLQLRPHHDPYLDDDMESQTDGSIISRTAVYV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcctttgctctgttctgttgctgctgtgcccagttttgcaggcacaggagata
aatgtcaacgagaaggtaactggcaccttggggcagcaaataactctgccctgcacattt
aacaacaatggtgttgatatgcaagtgactcagataatgtggatgaaagatagcacaaac
cttgctacctacagcccccagtttggcatccatgtgcagaacaagaatgatttcaatctg
actgccagcccaagcagtgccacgctccttatcaagttgctgcgggcttctgatgaagga
aactatatctgtgaggtcaccacctttccaggcggcaaccgtaggggcattacatatctc
agtgtgaaagctgaaccaagaaactcagctgaagctcttcctgtaattgccggcgacata
gaggttccggtggcaaaatgtgcatcagccaatggcaggcctccatcccagatcacttgg
agatcaacactcccaggcaattttgataccactatgaataataacacagatggtacatac
acggtggtcagcaactacaagctcgtcccaacctggactgctgacaagcaagaagtcatc
tgcattatttcctacgattccaaggagtctgtgattcccatcaccctgtccatacaatac
agcccaattgtcactattgaaggatacgataacaactggtatctgaaacggctcggggcc
tcgcttacctgtaatgctcacgggaacccccaacctacagtatacacctggaaaacggcc
gacggctcgccgctccctaacacggtgaaagctaaagataatgtgctgtatgtggatgaa
gtggacgagcgagtgaatacgaccatagtctgcgaggtgacaaatgcccttgggagccga
gcatcccaacaggaggtgctagtgagagaacgtgcgctcgagaaccagacaaacaacgca
ggagccattgccgggggtgtcattgggggggtcctggtcctgctccttctagcagccgtc
atcttcatcctcatccggaggggaggggtgcacaagaaagaacggggatcctacaacccc
aaacccagaatcttcggcagcgggaaaccctcccaggaatttacttaccaggacgactca
gagatgggcaaacctcttaaagcttctggtccattgagagacagtgggttgagcccttcg
ctggcagaggaagaggaggatgaatccgaagagaggatgaaatacaatgttttagaggac
gacgacgaagaagagaaattcaacgaggtggggcccatgctgcaacttagacctcaccac
gacccctacctggacgatgacatggagtctcagactgacggctctatcatctccaggact
gcagtgtatgtgtaa
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