Xenopus tropicalis (tropical clawed frog): 448160
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Entry
448160 CDS
T01011
Symbol
rapsn
Name
(RefSeq) 43 kDa receptor-associated protein of the synapse
KO
K24924
receptor-associated protein of the synapse
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
448160 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
448160 (rapsn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_2
TPR_1
TPR_8
TPR_MalT
TPR_7
TPR_10
DUF3856
zf-RING_2
TPR_6
SNAP
zf-RING_11
RPN7
zf-RING_5
ARM_TT21
RNPP_C
zf-rbx1
zf-RING_Vps41
Prok-RING_4
PCYCGC
Motif
Other DBs
NCBI-GeneID:
448160
NCBI-ProteinID:
NP_001005667
Xenbase:
XB-GENE-990995
UniProt:
Q6GL21
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All DBs
Position
4:16183699..16200065
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AA seq
412 aa
AA seq
DB search
MGQDQTKQQIQKGLRMYQSNQTEKALEIWAKVLEKTTDSAGRFRVLGCLITAHSEMGRYK
DMLKFAVIQIDTARELEDPDFLTESYLNLARSNEKLCEFQKTISYCKTCLNMQGTSVSLQ
LNGQVCLSLGNAYLGLSVFQKALECFEKALRYAHNNDDKMLECRVCCSLGGLYTQLKDLE
KALFFPCKAAELVNDYGKGWSLKYRAMSQYHMAVAYRKLGRLADAMECCEESMKIALQHG
DRPLQALCLLNFADIHRSHGDVEKAFPRYDSSMSIMTEIGNRLGQTHVLMGVSKCWLHQK
EMDKALDSLQKAQEMAEDIGNKLCLLKVHCLSEIIFRSKQQQRELRAHVVRFHECVEEME
LYCGMCGESIGEKNCQLQALPCSHVFHLRCLQTNGTRGCPNCRRSSVKPGFV
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaggaccaaaccaagcagcagatccaaaagggccttcggatgtatcagtcgaac
cagacagagaaggctttggagatctgggctaaagtgttggagaagaccacagattcggct
gggcggttccgggttcttggctgcctgataacggcccactctgagatgggaaggtacaag
gatatgttaaagtttgcagtgatccagatcgacacggctcgggagctggaggaccccgac
tttctgacagagagctacctgaacctcgcccgtagcaacgagaagctctgcgagttccag
aagaccatttcctactgcaagacctgcctcaatatgcagggcacctcagtcagcctccag
ctcaacgggcaggtgtgtctgagcctgggcaatgcctacctgggcctcagcgtcttccag
aaagccctggaatgcttcgagaaggccttgcgctatgcccacaacaacgacgacaagatg
ctggagtgcagggtgtgctgcagcttggggggtctctacacacagcttaaggatttggag
aaagcgctgtttttcccctgcaaggcggcagagctggtgaatgattacgggaagggctgg
agcctgaagtacagagcgatgagtcagtaccacatggcggtggcataccgcaagctgggc
cgcttggccgacgcaatggagtgttgtgaggagtcaatgaagatcgcccttcaacatgga
gaccgcccgcttcaagccctctgtctgctaaactttgctgatatccacagaagtcacggt
gatgttgagaaagcgtttcctcgttacgactcctcgatgagtataatgactgagattggt
aaccgcctgggtcagacccatgtgctgatgggagtgtcgaaatgttggctccatcagaag
gaaatggacaaggctctggattctctccaaaaagcccaagagatggcggaagatattgga
aataagctctgcctgctgaaggttcactgcctgagtgagattatattccgatcgaagcag
cagcagcgggagctccgtgcccacgtggtgcgattccatgaatgtgtggaggagatggag
ttgtactgtgggatgtgtggggagtccattggggagaagaactgccaactgcaagcgctt
ccatgctcccatgtcttccatctgcggtgtcttcagaccaacggaactcgaggctgccca
aattgccgccgttcctctgtgaaaccgggctttgtgtga
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