Xenopus tropicalis (tropical clawed frog): 448208
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Entry
448208 CDS
T01011
Symbol
app
Name
(RefSeq) amyloid beta A4 protein precursor
KO
K04520
amyloid beta A4 protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
448208 (app)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
448208 (app)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xtr00535
]
448208 (app)
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
448208 (app)
Peptidases and inhibitors [BR:
xtr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
448208 (app)
Proteoglycans [BR:
xtr00535
]
Cell surface proteoglycans
Others
448208 (app)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Others
448208 (app)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Baculo_gp41
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
448208
NCBI-ProteinID:
NP_001005698
Xenbase:
XB-GENE-479154
UniProt:
Q6DJB6
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Position
2:18401807..18519098
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AA seq
750 aa
AA seq
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MLPHITLLVLAAGALALEVPADGNAGLLAEPQIAMFCGKLNMHMNVQNGKWETDVSGTKG
CIGTKEGILQYCQDVYPELQITNVVEANQPVTIQNWCKRGRKQCKSRTHIVVPYRCLVGE
FVSDALLVPDKCKFLHQERMDICETHLHWHTVAKESCSEKSMSLHEYGMLLPCGIDKFRG
VEFVCCPTADESESFDSADAEDDSDVWWGGADADYIDRSDDKAVEAQPEEEEEVVEVEEE
EADDDEDDGDEAEEEPEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRA
MIPRWYYDVTERKCAQFIYGGCGGNRNNFDSEDYCMAVCGSVTVPATAASTPDAVDKYLE
NPNDENEHDRFLKAKERLEGKHREKMSEVMKEWEEAERQAKNLPKADKKAVIQHFQEKVE
SLEQEAANERQQLVETHMARVEAMLNDRRRIALENYITALQADPPRPRHVFNMLKKYVRA
EQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVINERMNQSFSLLYKVPAVAEEIQD
EVEELFQKEQNYSDDMVSNMVSDHRISYGNDALMPSLTETKTTVELLPVDGEFNVEDLQP
WHSFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDSEYRHDAA
YEVHHQKLVFFAEEVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTTIHHGVVEVDA
AVTPEERHLTKMQQNGYENPTYKFFEQMQN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccatataacgctgcttgtgctggctgccggagcgctagcgctggaggtacca
gcagatggaaatgccggcctgttggcagagccacagattgctatgttctgtggcaagctg
aatatgcacatgaatgttcagaatgggaaatgggagaccgatgtgtctgggacaaagggc
tgcatcggaaccaaggagggaatcctgcagtactgtcaggacgtttacccagagctgcag
attaccaacgttgttgaagccaaccagccggtgacaatccagaactggtgcaagcgaggg
cgaaagcagtgcaagagccgcactcacattgtggtcccctacagatgcctagttggggag
tttgttagtgatgctctgcttgttccagacaagtgcaagttccttcatcaggaaaggatg
gacatttgtgaaactcacctgcactggcacactgtggccaaagagtcctgcagtgagaag
agcatgagtctccatgaatacggaatgctcctcccttgtggaatcgataaattcaggggg
gtggagtttgtgtgctgccccactgctgatgaaagtgaaagctttgactccgcagatgca
gaggatgattctgatgtctggtggggaggcgccgatgcagattacattgacagaagtgat
gacaaggctgtagaagcccaaccagaagaagaagaggaagttgtagaggtggaagaggag
gaagctgatgatgatgaagatgatggggatgaagcagaggaagaacccgaggagccctat
gaagaagccaccgaaaggacaacaagtatagccactaccaccactactactacagagtct
gtggaagaagttgtaagagaggtgtgctctgagcaagctgagactggcccttgtcgagca
atgatcccccgctggtattatgatgtgacggaaaggaaatgcgcccagttcatttatgga
ggctgtggcgggaaccgaaacaactttgactctgaggattactgcatggcagtctgtggc
agcgtcacagttcccgccacagcggccagcaccccagatgcagttgacaagtacctggaa
aaccctaatgatgaaaatgaacatgaccgcttcctgaaagcaaaggagaggctggagggc
aagcacagggagaagatgtctgaggtgatgaaggaatgggaggaagctgaacgccaggca
aagaaccttcccaaggctgacaagaaggcagtaatacagcatttccaggagaaggttgaa
tccctagaacaagaagctgcaaatgaaaggcagcaactggttgagacccatatggcacgc
gtggaggccatgttaaacgatcgccgaagaattgccctggagaactacatcactgctctg
caagctgatcctccacggccccgccatgttttcaacatgctgaagaaatacgtgcgggca
gagcagaaggacagacagcacactctcaaacacttcgagcatgtccgaatggtagatccc
aagaaggcagctcagatccgatctcaggttatgacgcaccttcgagtgatcaacgagaga
atgaaccagagcttctcactcctttacaaggtgccggccgtggctgaggaaatccaagat
gaagtcgaagaactattccaaaaggagcaaaactactcggatgacatggtgtccaacatg
gtgagcgaccacagaatcagctatggaaacgatgcccttatgccttctctcaccgagacc
aagaccaccgtcgagcttcttccagtagatggagagttcaacgtagaggacctgcagccc
tggcattcattcggtgtggactccgttcctgcaaatactgagaacgaagtcgaaccagtg
gacgcccgccctgctgcagatagagggctcactacacggccaggctcaggacttactaat
attaaaacagaagaaatctccgaggtcaaaatggattctgaatacagacacgatgccgcc
tatgaagtgcaccatcagaaactggtcttctttgccgaagaagtgggatcaaacaaagga
gccatcataggtctgatggtgggaggcgttgtcatagcaacagtgatagtcatcacttta
gtgatgctgaagaagaagcagtacacaacgatccatcatggtgtagtagaggtggatgcc
gccgtgacaccagaagagcgccacctcaccaagatgcaacagaacggctacgagaaccca
acatacaagttcttcgaacagatgcagaactaa
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