Xenopus tropicalis (tropical clawed frog): 448258
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Entry
448258 CDS
T01011
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137
Mitophagy - animal
xtr04144
Endocytosis
xtr04145
Phagosome
xtr04148
Efferocytosis
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
448258 (rab5b)
04145 Phagosome
448258 (rab5b)
04137 Mitophagy - animal
448258 (rab5b)
04148 Efferocytosis
448258 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
448258 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448258 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
448258 (rab5b)
04031 GTP-binding proteins [BR:
xtr04031
]
448258 (rab5b)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
448258 (rab5b)
Endosome - Lysosome transport
448258 (rab5b)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
448258 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
448258 (rab5b)
Exosomal proteins of colorectal cancer cells
448258 (rab5b)
Exosomal proteins of melanoma cells
448258 (rab5b)
GTP-binding proteins [BR:
xtr04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
448258 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
448258
NCBI-ProteinID:
NP_001005723
Xenbase:
XB-GENE-489150
UniProt:
F7CJ19
LinkDB
All DBs
Position
2:complement(137831878..137867252)
Genome browser
AA seq
215 aa
AA seq
DB search
MAGRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALSGNKADLTSKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKTEPQNTSGAPGRSRGVDLHEQTQQNKSQCCSN
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccggtagaggagctgcaaggccaaacggtcagtcgcaagccagtaaaatatgccaa
ttcaaattggtgctgctgggtgaatcggcagtaggaaagtcgagcctggtattgcgtttc
gtgaaggggcaatttcatgagtttcaggaaagtaccattggtgcggcatttctcacacag
tctgtctgcctggatgacacaactgtaaaatttgaaatctgggatacagcaggacaagag
cgataccacagcttggcacccatgtattaccggggagcacaggctgccattgtggtatat
gatatcacaaaccaggaaacatttgccagagccaagacatgggtaaaagagttacagagg
caagccagtcctaacattgtgatagctttgtcagggaacaaggctgacctcactagtaaa
cggatggtggagtatgaagaagcccaagcatatgcagatgacaacagcctgctctttatg
gaaacctctgccaaaaccgctatgaacgtcaatgatctgtttcttgcaatagctaagaag
ctgccaaaaaccgaacctcagaacactagtggtgcacctggcaggagcaggggtgtggat
cttcatgagcagacccagcagaacaagagccagtgctgcagcaactga
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