Xenopus tropicalis (tropical clawed frog): 448298
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Entry
448298 CDS
T01011
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
448298 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448298 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
448298 (coro1a)
04147 Exosome [BR:
xtr04147
]
448298 (coro1a)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Coronins
448298 (coro1a)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
448298 (coro1a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
448298 (coro1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
ANAPC4_WD40
Trimer_CC
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EML
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
448298
NCBI-ProteinID:
NP_001005826
Xenbase:
XB-GENE-6449552
UniProt:
Q6DJ14
LinkDB
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Position
9:complement(2335560..2358070)
Genome browser
AA seq
459 aa
AA seq
DB search
MSRKVVRTSKFRHVFGQAVKADQCYDDIRVSQNTWDSNFCCVNPKFLAIVVEASGGGAFM
VLPLSKTGRLDKSQPVVCGHTAPVLDIDWCPHNDNVIASGSEDCSVMVWEIPDGGLTRSL
TEPLVTLEGHTKRVGIVLWHPTALNVLLSAGCDNLIMIWDVGTGQGIISIETHPDLIYSA
AWNLSGSLLCTSCKDKKIRLIEPRSGRIEAEKEKPHEGSRPVRAIFVSDDQILTTGFSRM
SERQVALWDLKSLGEPLTLQELDTSSGVLIPFFDPDTNVVYLCGKGDSSIRYFEVTDEPP
YVHYLSLYSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQED
LYPDTVGPDPALTAEEWLGGKNADPLLISLREGYAPSKSRELKVTKNVLNTRLPKRVGSN
EAGTQESALEQILGEIKQLKATLQGLEQRVAELEQKAAN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggaaggttgtgcgcaccagtaagttccgccatgtttttggccaagccgtgaaa
gccgaccaatgttacgacgacatccgcgtctcccagaacacctgggactccaacttctgc
tgcgtcaatcccaagttcctggccatcgtggtggaggccagcggggggggcgccttcatg
gttctgcctctctctaagacggggcgtctggacaagtcccagccggtggtttgtgggcac
acagcgcccgtcctggatatcgactggtgcccccataacgacaacgtcattgctagtggc
tcagaggactgcagtgtgatggtgtgggagattccggacggggggctgacccgctctctc
acagaaccactggtcacactggagggacacacgaagcgagtgggtatagtcttgtggcac
cccactgctctgaatgttctgctgagtgcaggctgtgacaatctgatcatgatctgggac
gtgggcaccgggcagggcattatctctatagagacgcaccccgacctcatatacagcgcg
gcctggaacctcagcggcagcctcctctgcacctcctgtaaggacaagaagatccgcctc
attgagccccggagcggcaggattgaagccgagaaggagaagccccacgagggcagccgg
ccggtccgcgccatctttgtctctgatgatcaaatactgaccactgggttcagccggatg
agtgagagacaagtagctctgtgggacctgaagtccctgggggagcccctgaccctacag
gagttggacaccagcagtggggtgctcattcccttcttcgaccccgacaccaacgtggtg
tatctgtgcgggaagggggacagcagtatccgctacttcgaggtgacggacgagcccccc
tacgtgcactacctgtccctgtacagcagtaaggagtcccagcgggggatgggctacatg
cccaaacggggcctcgaggtcaacaagtgcgagattgcccggttctacaagctgcatgag
aggaagtgtgagcccataataatgactgtgcccaggaagtcggaccttttccaggaggat
ttgtaccccgacactgtggggcccgaccccgccctgacggcagaggagtggcttgggggc
aagaacgccgaccccctgctcatctctttgcgggaaggttacgccccgagcaagagccgc
gaactcaaagtcaccaagaacgtcctcaatactcggctccccaagcgggtcggctccaac
gaggctggaactcaggagtcggcgctggagcagatcctgggggagataaagcagctgaaa
gccacattgcagggactggagcagcgagtggcggagctggagcagaaagcggccaattag
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