Xenopus tropicalis (tropical clawed frog): 448396
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Entry
448396 CDS
T01011
Symbol
rbm17
Name
(RefSeq) splicing factor 45
KO
K12840
splicing factor 45
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
448396 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
448396 (rbm17)
Spliceosome [BR:
xtr03041
]
Complex A
U2 snRNP components
U2 related factors
448396 (rbm17)
Complex B
448396 (rbm17)
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Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
448396
NCBI-ProteinID:
NP_001006732
Xenbase:
XB-GENE-493588
UniProt:
Q6DIQ0
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Position
3:complement(84298875..84318936)
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AA seq
399 aa
AA seq
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MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKTQRTKQSTVLAPVIDLKRA
SAAEERQIADPSPHVGAGIKESVPSGFSAGEVLVPLADEYDPMFPNEYEKVVKRQREERQ
RQRELERQKEIEEREKRRKDRHEASGFSRRPDPESDEDEDYERERRKRTMGGAAIAPPTS
LMEKDRESIVPAYDDEPRPRPPMAKAAIPPPMYDEPERPRSPTGPSNSFLANMGGTVAHK
IMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDLADKVEAAKKADPNPLTEIL
KNPTKVVLLQNMVGAGEVDEDLEAETKEECEKYGKVGKCVIFEIPGTPDDEAVRIFLEFE
RVESAIKAVVDLNGRYFGGRIVKACFYNLDKFRTLDLGD
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatatgatgatcttggtgtggagaccagtgactcaaaaacagaaggatggtca
aaaaacttcaagttattgcaatcccaattgcaagttaaaaaggcagctcttacacaagca
aagacacagcgaacaaagcagagtacagttcttgctcctgtcattgaccttaagagagca
agtgcagctgaagaacgccagattgcagacccatccccccatgtgggtgctggaataaag
gaatccgttcccagtgggttttcagctggtgaagttctggtccccttggctgatgaatat
gacccaatgttccctaatgaatatgaaaaggtggttaaacgtcagagagaggagaggcaa
cgtcagcgggaactggaaaggcagaaagaaatagaagaaagggaaaagaggcgtaaggac
aggcatgaagctagtggattctctcgcagacctgacccagaatcggatgaagacgaagat
tatgaacgagaaaggagaaaaagaacaatgggaggagcagccatcgcaccaccgacatcc
cttatggaaaaggacagggaatctattgtgcctgcttatgatgacgagccaaggccacga
ccaccaatggcaaaggctgcaattccaccacctatgtatgatgagccagagagaccaaga
tcaccaactgggcctagcaattctttccttgcaaatatgggtggtactgtggcccacaaa
atcatgcagaagtatggctttcgggaaggacagggccttggcaagcacgagcagggtctc
agcactgcactttctgttgaaaagacaagcaagaggggaggcaaaattattattggtgac
ttagctgacaaagttgaagcagctaagaaagcagatccaaaccctctgacagaaatacta
aagaatcctactaaagttgttttgcttcagaacatggtaggtgctggggaagttgatgaa
gatctggaagctgaaacaaaggaagagtgtgaaaaatacggcaaagttggaaaatgtgtc
atttttgagattcctggtacgccagatgacgaggctgtaagaatatttttggaatttgaa
agggttgaatctgcaattaaagctgtggtggatctaaatgggaggtattttggtggccga
atagtaaaggcttgtttctacaacctcgacaaattcagaacgctggatcttggggattaa
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