Xenopus tropicalis (tropical clawed frog): 448397
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Entry
448397 CDS
T01011
Symbol
washc5
Name
(RefSeq) WASH complex subunit 5
KO
K18464
WASH complex subunit strumpellin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
448397 (washc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448397 (washc5)
Membrane trafficking [BR:
xtr04131
]
Protein recycling
Others
WASH complex
448397 (washc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
PI_PP_I
DUF3106
Motif
Other DBs
NCBI-GeneID:
448397
NCBI-ProteinID:
NP_001004970
Xenbase:
XB-GENE-5781989
UniProt:
Q6DIP9
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All DBs
Position
6:complement(140392245..140412697)
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AA seq
1159 aa
AA seq
DB search
MVDFLAENNLCGQAILRIVSRGNAIIAELLRLSEFVPSVFRLKDKADQQKYGDIIFDFSY
FKGPEVCEGRLEAKPELQDLDEEFRENNIEILTRFYLAFESVHKYIVDLNRYLEDLNEGI
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVAYYRYSAARSSVD
SNMDDICKLLRSTGYSSQPGAKRPPNYPESYFSRVPISETFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALATQAAILYVILYFHPPTLHTHQAKMREIVDKYFPDNWVISIYMGITVNL
MEVWEPYKAAKTALNYTLDLPNIKEQASRYAKIIESLHPQVQQFLKEGFLREEFVLDNIP
KLLNCLRDCNVAIRWLMLHTADSAYDPNNKRLRQVKDQVLADSKYNPKILFQLLLDTAQF
EFLLKEMFKQMLSEKQNKWESYKKEGSERMTELADVFSGVKPLTRVEKNEHLQAWFREIA
KQIHSLNYDDSTAAGRKTVQLIQALEEVQEFHQLETNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQLIDSFTAIMQESIRANPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQYYSGELVFYVRKVLQIIPESMFTSLAKIIKLQTHDIIEVPTRLDKDK
LRDYAQLGARYEVAKLTNAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAV
ALHKGLIFNSRAKPSELLPKLKDMAATMDGFHRSFEYIQDYVSIYGLKIWQEEVSRIVNY
NVEQECNNFLRTKIQDWQSMYQSTHIPIPKFPPVDESMTFIGRLCREILRITDPKVTCYI
DQMNTWYDMKTHQEVTNNHLFSEINDSLGTFGLNGLDRLLCFMIVKELQNFIRLYQRLIL
RDKSGQETLRALQKVVTPVKGIVANSAKIYSAAIAKTQKIWPAYLDAIMKVGQMQVLRQQ
IANELNYSCKFDSKHLAGALENFNEAILADIQAHYQDPSLPCPREDNTLLYEITAYLEAA
GTHNPLNKIYITTKQLSFFPIVNFLFLVAQLPKLQYNKNLGMTCRKPADPIDWVPLVLGL
LTLLKQFHSRYTEQFLALIGQFIRSSLEQSTSQKIPEMPADVVGALMFLEDYVHFAKLPR
RVVEAHVPNFIFDEFRTIQ
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggttgatttcctggcagaaaataacctgtgcgggcaagccattctgcgcattgtctcc
cgtggaaacgctatcatagcggaactgttacggctctcggaatttgttcccagtgtgttc
cgccttaaagacaaagcagatcagcagaagtatggagatatcatattcgattttagttac
ttcaaggggcctgaggtctgtgaggggagactggaagccaaaccagagctccaggacctg
gatgaggaattccgtgaaaacaacatagagatactaacaagattttatttggcctttgaa
agcgtacacaagtatattgttgatttgaacaggtatttggaggatcttaatgaaggcatt
tacattcagcaaaccctggaaactgtgcttctcaatgaggacggaaaacagctgctttgt
gaggcgctgtacctgtacggtgtgatgctgctggttatagaccagaagatcgaaggggaa
gtgcgggagaggatgctggtcgcgtattatagatatagcgcagcaagatcctctgtcgat
tcaaacatggatgatatctgcaagctacttagaagtacaggctactccagccagccaggc
gctaaaagacccccaaactaccccgagagctacttcagccgcgtgccaattagtgaaacc
tttatcagcatggtgattggcagattaagatcagatgatatctataaccaagtgtctgcc
tatccattgccagagcaccgtagtacggcacttgccacgcaggctgccattttgtatgtg
attctctacttccacccaccaactctgcacactcaccaagccaaaatgagagaaatagtg
gataagtatttcccagataactgggttatcagcatctatatggggatcactgtgaatctg
atggaagtgtgggagccctacaaggctgcaaagactgctttgaattacacactggacctg
cccaatatcaaggagcaggcttccaggtatgcaaaaatcattgagagcctgcacccccag
gttcagcagttcctgaaggagggctttctccgagaggagtttgtactggataacatcccc
aagctgctgaattgtctgcgggactgcaatgtcgccatccgatggctcatgcttcacaca
gctgattctgcttatgatccaaacaacaaacggcttcgccaggtaaaagatcaggttctt
gctgattccaagtacaaccccaagattctgttccagttgctgctggatactgcacagttt
gagttccttctgaaggagatgttcaaacagatgctgtcagagaagcaaaacaagtgggaa
agctataagaaagaaggatcagaaagaatgacggagctggcagatgttttctctggcgtc
aaacccctcaccagggtagagaaaaatgaacacttgcaagcctggttcagagagatcgcc
aagcaaattcactccttaaattatgatgattccactgctgctgggaggaagaccgttcag
ctcatccaggctcttgaagaggtccaagaattccatcagctggagacaaaccttcaggtg
tgccagttcttggctgatacccgcaagttcctccatcaaatgatccgcaccattaacatt
aaagaggaggttctgatcactatgcagattgtgggtgacctctcgtatgcctggcagctg
attgacagcttcacagcaatcatgcaagagagtatcagagccaacccgtccatggttacc
aagctgagggccactttccttaagctggcctctgcacttgatttgcccttgctacgcatc
aatcaggcaaacagccctgacctactcagtgtatcccagtactactcaggagagctggtt
ttctatgtcaggaaggttctgcagatcatcccggagagcatgttcacttccctagccaag
atcatcaagttacagacacatgacattatcgaagtgccaacccgattggacaaggacaaa
ctgagagactacgctcagcttggggctagatatgaggttgccaagttgaccaatgccatt
tcaatctttactgaaggaattctaatgatgaagactacacttgtaggcataatcaaggtg
gatccaaagcagcttttggaggatgggatcaggaaggagttggttaaaagagttgctgtt
gctctacacaaagggcttatcttcaactccagagcaaagcccagcgaactgctgccaaag
ctgaaagacatggctgccaccatggatggattccatcgctccttcgagtacatacaagac
tacgtcagcatttatggcttgaaaatttggcaggaggaagtatcccgtattgttaattac
aacgtagaacaggaatgcaacaacttcctaagaacaaagattcaagactggcagagcatg
tatcagtcaactcacatccctattcccaaatttcctcctgtggatgaatcaatgacgttt
ataggacgtctgtgtcgggaaatcctgagaattactgatccgaaggttacgtgttacata
gatcagatgaacacgtggtacgacatgaaaactcaccaggaagtcactaataaccacctc
ttctcagagatcaacgattcactgggaacttttggcttaaatggcttggacaggttactt
tgctttatgatagtgaaggaactgcagaacttcatccgcttgtatcagaggttaattctg
agggataaaagtggccaggagacattacgggccttacagaaggtagttactccagttaaa
gggattgtagctaattctgccaaaatatactctgctgccattgcaaaaacccagaaaatc
tggcctgcttatcttgatgctataatgaaggttggacagatgcaagtgttaagacaacag
attgccaatgagttaaactactcgtgtaaatttgactctaagcacctggcaggagcccta
gagaactttaatgaagccatattggctgacatacaagcccactaccaggacccgagcctt
ccctgcccacgagaagacaacacgctcctatatgagatcactgcatacctggaagcagct
gggacacacaaccccttgaacaaaatttacattactaccaagcagctctctttcttccct
attgtgaatttcctgttcctggtcgcccagttgccaaagctgcagtataacaagaaccta
ggaatgacatgcaggaagccggcagatccgattgattgggttccattggtactcggcctg
ctaacactgctcaagcagttccattcccgttacactgagcagtttctggccctgataggg
caatttatccgttcgtcattggaacaaagcaccagccagaagatcccagaaatgccggct
gatgttgtgggtgcacttatgtttcttgaagattatgttcattttgctaaactgccaaga
agggttgtcgaagcacatgtgcctaatttcatttttgatgaattccggacgatacagtga
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integrated database retrieval system
