Xenopus tropicalis (tropical clawed frog): 448402
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Entry
448402 CDS
T01011
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448402 (rnf126)
04121 Ubiquitin system [BR:
xtr04121
]
448402 (rnf126)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
448402 (rnf126)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
448402 (rnf126)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
448402 (rnf126)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
zf-RING-like
DZR_2
C1_2
HypA
Rad50_zn_hook
Zn_ribbon_6
DUF7560
DZR
Motif
Other DBs
NCBI-GeneID:
448402
NCBI-ProteinID:
NP_001006735
Xenbase:
XB-GENE-5960892
UniProt:
Q6DIP3
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All DBs
Position
1:complement(105795017..105843223)
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AA seq
311 aa
AA seq
DB search
MAEALPEAGRYFCHSCTAEIIPRLPEYTCPRCDSGFIEELPETRNSENNSSNNSGTDQNR
PSFENLESAQFTLPSGYGQVTFGIFNEGLDFPIFGTSGPVEEPRDGESRREHQSRQRYGA
RQPRARLSTRRAAGRNEGVPTLEGIIQQLVNGIIAPTAMSNLGVGPWGVLHSNPMDYAWG
ANGLDTIITQLLNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESV
RQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNPPGLTEMTFSSSSTSSSSSTS
PTDENNAANNS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctctaccggaggccgggaggtacttctgtcacagctgtacggccgagatc
atcccgcggttaccggaatatacctgccctaggtgtgattcaggattcatagaggagctc
cctgaaacaagaaattcagaaaacaatagcagcaacaattctggaacagatcaaaacaga
ccttcgtttgagaacctagagtctgctcagttcacgcttccttctgggtatggccaggtc
acatttggaatctttaatgagggcctggactttcccatctttggcactagtggtccagtt
gaagagccacgtgatggagagagcaggagggagcatcagtcacggcagagatatggtgct
agacagccccgtgctaggttaagcacaagacgagctgcaggaaggaacgagggagtacct
acactagaggggatcattcagcagttggtgaatgggattatcgcacctacagcaatgtca
aacctaggggtgggaccatggggtgtcctgcattccaaccccatggattatgcatggggt
gcaaatggcctagatacaataatcacacaattacttaatcagtttgaaaacacaggccct
ccccctgcggacactgaaaaaatacaagcccttcctaccatccagataacagaagagcat
gtgggttctggtctggagtgtcccgtgtgtaaagaggattatactgttggtgaaagtgtg
cggcaacttccttgcaatcatttatttcacaatgactgcatcatcccttggttagaacag
catgacacatgtcctgtttgccgaaaaagtcttagtggccagaacacagcaacgaatccc
cctggactgacagaaatgactttctcctcatcttcaacctcttcttcctcctccacctcc
cctactgatgaaaataatgctgccaacaattcctga
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