KEGG   Xenopus tropicalis (tropical clawed frog): 448473
Entry
448473            CDS       T01011                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:xtr04990]
    448473 (wdr1)
Domain-containing proteins not elsewhere classified [BR:xtr04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   448473 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 eIF2A WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_SPT8 PROPPIN WDR54 RMC1_N WD40_RFWD3 Beta-prop_IFT122_2nd DUF7165 KNTC1_N Beta-prop_DCAF12 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 448473
NCBI-ProteinID: NP_001006781
Xenbase: XB-GENE-489897
UniProt: Q6DIF4
LinkDB
Position
1:complement(26705529..26734465)
AA seq 607 aa
MPYELKKVFASLPQVERGVAKIITGDPKGNNFLYTNGKSVIIRNIENPAIADIYTEHAHP
VVVARYAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVV
GEGREKFGSVFLWDTGSSVGEISGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFK
FKFTMADHSRFVNCVRFSPDGSRLASAGADGQIFLYDGKTGEKVGNLGGSKAHDGGIYAV
SWSADSTQLLSASGDKTAKIWDVAANSAVTTFHLGTEVLDQQLGCLWQKDYLLSVSLSGY
INYLDKNNPSRPLRVIKGHNKSIQCMTVHNSDGRSTIYTGSHDGHINYWDAETGENDTFT
GKGHTNQVSRMDLDSSNQLITCSMDDTVRYTSLTSKDYSSSESVKMDVQPKCVAVGSGGY
VVTLCIGQIVLLKDKKKVFAIDSLDYEPEAVAIHKGSGTVAVGGVDGNVHLYSIQGNSLK
DEGKSLPVKGAVTDLAYSHDGAFLAVTDANKVVTVFNVADGYSEQNVYYGHHAKAVSVAW
SPDNEHFASSGMDMMVYVWTLSDPDARIKIPDAHRLHHVSSLAWLDEHTLATVSHDACVK
QWTVTFK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgccttacgagctaaagaaagtgttcgccagtctcccacaggtggagagaggggtggca
aaaattatcactggagacccaaagggaaataactttctgtacaccaatggaaaaagtgtc
atcatcaggaatattgagaacccagctattgctgatatatacactgagcatgcccatcca
gttgttgttgcccgttatgctcccagtggattctacattgcatctggagacacttctgga
aagctgaggatctgggacacaacccagaaagagcacttgctaaaatatgagtaccagcca
tttgcaggaaagattaaagatatcgcttggactgaggatagcaagagaatcgctgtggtg
ggtgaaggccgggaaaagtttggctctgtctttctttgggacactggctcctcagttgga
gaaattagtggcaacatcaaagtcatcaactctgtggacatcaaacagacaaggccgtac
cgtctagtgactggcagtgatgacaactgctgcgctttctttgaagggccacctttcaaa
ttcaagtttacaatggctgaccacagtcggtttgtaaattgtgtccgattctctccagat
ggaagtagacttgcctctgctggtgctgatgggcagattttcctttatgatgggaagacc
ggcgaaaaggttggcaatcttggaggaagtaaagcacacgatggtggcatttatgcggtt
agctggagtgctgacagcacccaactgctttctgcatctggtgacaaaacggcaaagatc
tgggacgttgctgctaattctgcagtcactacatttcatcttggcacagaagtattggac
cagcagttgggctgtttgtggcaaaaggactacttgctgtctgtttcactttccggttac
atcaattatctggacaaaaataatccttccaggccattacgtgtaattaaggggcacaac
aagtcaatacagtgtatgactgtacataatagtgatggccgctctaccatttatacagga
agtcatgatggacacatcaattattgggatgctgagacaggggagaatgacacattcact
ggtaaaggccataccaaccaagtttctaggatggacctggacagctccaatcagctgatc
acttgcagtatggacgatactgtgcgctataccagtctgaccagcaaagattacagttct
tcggaatctgttaaaatggacgttcaacctaaatgtgttgctgttggttctggtggatat
gttgtaacattatgcattgggcagattgttctgctgaaagacaagaaaaaggtttttgca
attgactcgttggactatgaaccagaggctgtagcaattcacaagggctccggcacagtt
gctgttggtggagtggatgggaacgttcacctgtattcgattcaaggaaattctttgaag
gatgaaggcaagagcttaccagtaaaaggtgcagtgactgaccttgcctattcccatgat
ggtgccttccttgcagtcaccgacgctaacaaagtcgttacagtcttcaatgtggctgat
ggatattcggagcaaaatgtttactatggacaccatgcaaaagctgtttctgtagcctgg
tctcctgacaacgagcactttgcaagtagtggcatggatatgatggtgtatgtttggacc
ttgagcgatccagatgcaagaatcaaaataccagatgcccataggctacaccatgtgagc
agcttggcctggttggacgaacacacgttggcgacggtatcccatgatgcatgtgtaaaa
cagtggacagtcaccttcaaatga

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