Xenopus tropicalis (tropical clawed frog): 448491
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Entry
448491 CDS
T01011
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
448491 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xtr03021
]
448491 (gtf2e1)
Transcription machinery [BR:
xtr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
448491 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
448491 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
448491
NCBI-ProteinID:
NP_001005005
Xenbase:
XB-GENE-959290
UniProt:
Q6DFT2
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All DBs
Position
2:2928098..2939157
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AA seq
435 aa
AA seq
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MTDPDVATEVPAVLKRLAKYVVRGFYGLEHALALDILIRNPCVKEDDMMELLKFDRKQLR
AVLNTLKGDKFIKCRMRVETATDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPNCCSTFTDLEANQLFDPMTGMFRCTFCQTEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDINLAYEILEPEPTEIPSLRQNKERAAAAAAAASGPHREAWASKG
PSYEDLYTQDVVISMEEQEDLQRAAEGKSVKERPIWLRESTVQGAYSESGDLKDGGLGTG
PFQEPEENRPMGDENEEVMQALLIHEKKSAAAVGASPAPASNALGGSDSDSDTSESDQDS
PAPRQPVGTLSHAYDEDDEDDEFEDVASELTVTVGGRPYPYSEVSQRPELVPQMTPQEKK
VYIEMGQKMFMDLYD
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacggacccagatgtggctacagaagtccccgccgtgctgaaacgcctggccaagtac
gtggtacgtgggttctacgggctggagcacgctctggcgctggatattctcatccggaac
ccctgtgtgaaggaagacgacatgatggagctgctgaagttcgaccggaagcaactgaga
gccgttctcaacactctcaagggcgacaaattcatcaagtgccgaatgcgcgtggagacc
gccaccgacgggaagaccaccaggcacaactactactttattaactacaggctgctggtc
aacgtggtgaagtacaagctggaccacatgaggcgccggatcgagaccgacgagagagat
tcaaccaacagagcgtctttcaagtgcccaaactgctgcagcactttcactgacctcgag
gctaaccagctcttcgaccccatgacagggatgtttcgctgcactttctgccagacggag
gtggaagaggacgagtcggcgatgcccaagaaggatgccaggaccctagttgcccgcttt
aacgagcagattgagcccatatacgcgctgctcagggagaccgaggacatcaatttggcc
tacgagatcctggagcccgaacccaccgagattccttccctcaggcaaaacaaggaaagg
gcagcagcagccgcagccgcagcctcggggccccacagggaagcttgggccagcaagggc
ccctcctacgaggacctgtacacacaggatgtggttatcagcatggaggagcaggaagac
ttgcagcgggcggctgagggcaaatcagtgaaagagagacccatctggctgcgagagagc
accgtgcagggggcctacagcgagagcggagacctgaaggacggtgggttaggtactggt
ccattccaagagcccgaggagaaccgaccaatgggtgacgagaatgaggaagtgatgcag
gccctgctgattcatgaaaagaagagcgcggcggccgtcggggcttccccggcccctgca
tccaacgccttgggcggcagcgactccgacagcgacaccagcgaatcggaccaggacagc
ccggcccctcggcagcccgtcggcaccttgtctcacgcctacgacgaggatgatgaagat
gatgagtttgaggatgtagcgagtgagctgacagtcactgtgggggggcgcccgtacccc
tatagcgaggtgagccagcgccccgagttggtgccgcagatgacgccgcaggagaagaag
gtttatatagagatgggacagaaaatgtttatggacctgtacgactga
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