Xenopus tropicalis (tropical clawed frog): 448512
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Entry
448512 CDS
T01011
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
448512 (apex2)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
448512 (apex2)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
448512 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
448512
NCBI-ProteinID:
NP_001006804
Xenbase:
XB-GENE-1012054
UniProt:
Q6DFQ8
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Position
8:complement(24650450..24657391)
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AA seq
517 aa
AA seq
DB search
MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSR
GRSGYSGVATFCKSSTTPWAAEEGLSGMLCNHTGSIGCYGNTEEFLEEELQSLDQEGRAV
LTQHRIRNCEGKEETLTVINVYCPRADPEKPERKTYKLRFYRLLQTRAEAILQKGGHVII
LGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPVPSQKGDSETGTPPSGGSGRFY
DSFRYFHPTQRNAFTCWCSASGARQTNYGTRIDYILGNSELVEREFLDSIIMPEVEGSDH
CPVKAVMKCRPIAANKCPPLCTKYLPEFAGRQQKLLQFLMKKENTSGNATEESSELLGSQ
SSAEGAEISTVRKRGSDKLNGTSRKKNKMGTNIGQGSLLSFFKPDGQKLTVAPEHNPSDV
SICKKEDTMPKEYKTAPSAVKYNQPQAAFWKSLLKGPPPPPNCKGHGEPCVLRTVKKAGP
NCGRQFYVCARPEGHSTNPQARCNFFLWLTKKAGGED
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgagttggaacatcaatgggatccgggcaactcgggtgggactaaaggag
acgctggattccctggatgctgatattatctgcctgcaagagactaaagtcaccagagat
ctgctggatgaaccttccgccatagtggaaggatataactcctacttcagttttagccgt
gggcggagtggttactcaggggttgcaacattctgcaagagcagcacaaccccatgggca
gctgaggaagggctctccggcatgttgtgcaaccatacgggttccatcggctgctatgga
aacacagaagagttcttagaagaggagctgcagtccttagaccaggagggcagagcagta
ctaacacaacacaggatccgaaactgtgagggtaaagaggaaacgctcactgtgatcaat
gtttactgccctcgcgctgacccagaaaagccagagcggaagacctacaaactgcgcttc
tatcgcctgctgcaaacgcgtgctgaggccattttgcagaaaggcggacatgtgattatc
ttgggagacgttaacacttcccacaggcctctcgatcactgtgatccgacagatttggaa
acctttgaggagaatcccggtcgccagtggcttaatcagttcctgggcgatcctgtccca
tcccaaaagggagattcagaaacaggcacaccacctagtggtggatctgggcgcttctat
gacagtttccgatacttccaccctacacagaggaacgccttcacgtgctggtgttccgct
tctggggctaggcagactaattatggcactcgtattgattacatcctgggaaacagtgag
ctagtggagagagaatttctggattcaataataatgccagaggtggaagggtcagaccac
tgtccggttaaagctgttatgaaatgcaggcctatagcagctaacaaatgtccacctttg
tgcaccaagtatctgcctgagtttgctggccgacagcagaagttattgcagtttctgatg
aaaaaggagaacacttcaggcaacgcaacagaggaaagctcagagctgctgggctctcaa
tcatctgcagaaggagctgagatcagtactgtacgcaagcggggctctgataaactgaat
ggcacttcaaggaaaaagaacaaaatggggacaaatattggtcaaggcagcctcctgagc
ttctttaagccagatgggcagaaattaactgtggcaccagagcacaatcccagtgatgtg
tccatttgtaaaaaggaggatacaatgcccaaagaatataaaaccgctccttctgcagtt
aaatataaccagccacaggctgccttttggaaatccttgctcaagggcccccctccccca
cccaactgtaagggccatggtgaaccctgtgttctgcggacggtaaaaaaggccggtcct
aactgtggacgccagttttatgtctgtgcccggcctgagggtcattcaacaaacccccag
gccagatgtaactttttcctctggctcaccaaaaaagctggaggtgaggactga
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