Xenopus tropicalis (tropical clawed frog): 448516
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Entry
448516 CDS
T01011
Symbol
ufd1
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
448516 (ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
448516 (ufd1)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
448516 (ufd1)
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
448516
NCBI-ProteinID:
NP_001006806
Xenbase:
XB-GENE-963687
UniProt:
F6TDH6
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Position
1:complement(154216425..154231553)
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AA seq
307 aa
AA seq
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MFSFNMFDHPIPRVFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLLQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERHTQQEEPTEIEPDHSEYAADLGFRAFSGSGNRLDGKKK
GIDPSPFPLKPEDIRRGIPNYDFKIGTITFIRNSRPQAKKVEDDDAVSQFIAFSGEGQSL
RKKGRKP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttttctttcaacatgtttgaccaccccataccccgggttttccaaaaccgcttctct
actcagtaccgttgctactccgtttccatgttggcgggtcccaatgaccgatctgatgtg
gagaaaggagggaaaattatcatgcctccatctgctttagatcaactcagtcgtttgaac
attacttaccccatgctcttcaagctgaccaataaaaattctgacaggatgacacattgc
ggtgttcttgaatttgttgcagatgaaggcatatgttacttgcctcattggatgatgcag
aatttgctgctagaagaaggaggactgttacaggtggaaagtgttaaccttcaagtagcc
acatattcaaaattccagccacagagccctgatttcttggatattactaaccccaaagct
gtactggagaacgctttgaggaattttgcttgtcttaccactggagatgtaatcgccatt
aactacaatgaaaagatctatgaacttcgagttatggaaacaaaacctgacaaagctgtg
tctatcatagaatgtgatatgaatgttgattttgatgccccacttggatacaaggagcca
gagagacatacacagcaggaagaaccaacagaaattgaaccagaccacagtgagtatgca
gcagaccttgggttcagggcattctctggttctgggaacagattggatggaaagaagaag
gggattgaccccagtcccttcccattaaagccagaagacatacggagaggaattccaaat
tacgacttcaagattggaacaatcacattcatcagaaattcaaggccacaggcaaagaag
gtggaagatgatgatgctgtgagccaatttattgcattttctggagaaggacagtctttg
cggaagaaaggcagaaaaccataa
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