Xenopus tropicalis (tropical clawed frog): 448544
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Entry
448544 CDS
T01011
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR precursor
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
448544 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
xtr04050
]
448544 (edar)
Cytokine receptors [BR:
xtr04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
448544 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
PFF1_TM
FAM176
FHIPEP
TNFR_c6
CLN3
MsddA-like
Motif
Other DBs
NCBI-GeneID:
448544
NCBI-ProteinID:
NP_001006820
Xenbase:
XB-GENE-945379
UniProt:
Q6DF68
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Position
2:109170694..109241545
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AA seq
451 aa
AA seq
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MNQSSDRKWTHIFRFIMVSLLCSVHADYGNCGENEYYNQTTGMCQSCPECEPGEEPYMTC
GYGFKDEDFGCVPCQSGKYSKGGYQICRRHKDCEGFFRATVLTAGDSENDAECGPCLPGY
YMLENRPKSMYGNVCYSCLSAPPNTKECIGLSAPISGSSTSTTGSSTISPFQHPHKVEVS
GQGHLATALIIAMSTIFIMAIAIVLIIMFYILKTKPSSQACCTGPSKNVEAQINQQEEKK
EVPAENIFSEKDEFEKLSETQTKTEKNENDASSENERLLSRSMDSDEEAAIDKQGSAELC
LLSLVHLARDKSTTNSKLTGIHSRRKKILDLYASVCNVAEGLSPTELPFDCLEKTSRMLS
STYNTEKAIVKTWRHLAESFGLKRDEIGGMTDGLQLFDRISTAGYSIPDLLTRLVQIERL
DAVESLCTDIVEWAQGTPTLNPPSLPKNESS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatcaagtgacagaaaatggacccatatattccgctttataatggtgtccctg
ttgtgctctgtgcatgcagattatgggaactgtggggaaaatgaatattataatcagacg
actggcatgtgccaaagctgccctgaatgtgagcctggggaagaaccatatatgacctgt
ggttatggctttaaagatgaagactttggctgtgttccttgccagtctggcaaatattca
aaaggaggctaccagatttgcagaaggcacaaagattgcgaggggtttttccgcgctact
gtcctaactgcaggggacagtgagaatgatgcagaatgtggaccatgtcttcctgggtac
tacatgttggagaaccgtcccaagagcatgtatggaaatgtttgctactcctgtctgtct
gcgcctccaaacaccaaggaatgtattggattatcagcccctatttctggcagctccaca
agtacaacaggctcaagcaccatctcccctttccaacatccacacaaagtagaagtgtct
ggacaaggacatttggccacggctctgattattgcaatgtcaacaatattcatcatggcc
atagccattgttctcatcatcatgttctacattttaaagaccaagccttcttctcaagca
tgttgcaccggcccttcaaagaatgtggaagctcagatcaaccaacaggaagagaaaaag
gaggtgccagctgaaaatatcttttctgaaaaagatgaatttgaaaaattgtccgagacc
cagactaaaacagaaaaaaatgaaaatgatgcctcgtcagagaatgagcgtcttttaagc
cgtagcatggacagcgatgaagaggcagccattgacaaacaagggagcgcggagctctgc
ctcttatcattagtgcacctggcaagggacaaatccaccacaaacagcaaattaactggg
atccacagtcggaggaaaaagatactggacctttatgccagtgtatgtaatgttgcagaa
ggtctcagccctacagaactgccgtttgactgcctagaaaagaccagcagaatgcttagt
tctacatacaatacagaaaaagcaatagtcaaaacatggcgtcaccttgctgagagcttt
ggcttgaaaagggatgaaattggtggaatgacagatggacttcagctctttgatcgcatc
agcactgctggatacagcataccagacctgcttactaggctggtacagattgagagactg
gatgctgtggaatccctgtgcacagacattgtagagtgggcacaaggaacacccacatta
aacccaccttctttacccaaaaatgaaagctcgtga
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