Xenopus tropicalis (tropical clawed frog): 448555
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Entry
448555 CDS
T01011
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04144
Endocytosis
xtr04517
IgSF CAM signaling
xtr04530
Tight junction
xtr04810
Regulation of actin cytoskeleton
xtr05100
Bacterial invasion of epithelial cells
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
448555 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
448555 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
448555 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
448555 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
448555 (arpc1b)
05100 Bacterial invasion of epithelial cells
448555 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448555 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
448555 (arpc1b)
Membrane trafficking [BR:
xtr04131
]
Others
Actin-binding proteins
Arp2/3 complex
448555 (arpc1b)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
448555 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_EML
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
eIF2A
Rax2
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Tricorn_2nd
Beta-prop_SPT8
SH3_3
Motif
Other DBs
NCBI-GeneID:
448555
NCBI-ProteinID:
NP_001006824
Xenbase:
XB-GENE-490410
UniProt:
Q6DF56
LinkDB
All DBs
Position
9:41791005..41853931
Genome browser
AA seq
369 aa
AA seq
DB search
MAYHSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKKDGDKWTKIHELKEHNGQVTGIDW
APDSNRIVTCGTDRNAYVWTLRNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERP
APTPWGSKMPFGELMFESSSSCGWVHSVCFSHSGDRMAWVSHDSTICIADAPKKMRVTTS
ITDTLPLLCLTFITENSLVAAGHDCYPVLYSYVEAQGTLSFGGKLDIPKQSSQRGMTARE
RFQNLDKKASSDTNNVTLDSLHKNSISQISVLSGGKAKCSKFCTTGLDGGMCIWDVKILE
SAMKDLKIK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccacagttttctactggagcccattacctgtcatgcttggaacaaagatgca
acccaaattgccttctgtccaaatagtcatgatgttcacatttacaagaaagatggagat
aaatggaccaaaatccatgagctgaaggaacataatggacaagtcacaggtattgactgg
gctcctgacagcaatcgcattgtaacctgtggtacggatcgtaatgcctatgtgtggact
ctaagaaacaatgtgtggaaaccgacactggtcattctcaggattaaccgtgctgcacgt
tgtgtaaagtggtcacctaaggagaacaagtttgcagtgggcagtggatccaggctaatt
tccatctgctacttcgagcaggaaaatgattggtgggtgtgtaagcacatcaagaaacca
atacgctcaacggtcctgagtctggattggcatccaaacaatgttcttctggcagctggg
tccagtgattttaagagcaggatcttttcagcttatatcaaagaagtcgaagaacgccct
gcccctactccatggggctccaaaatgccttttggagagttgatgtttgagtctagcagc
agctgtgggtgggtgcatagtgtctgcttttcccatagtggagaccgcatggcttgggtg
agccatgatagcacgatttgcattgctgatgcccccaagaagatgagagtcaccacctcg
attacagacactttgccgctcttgtgtttgacctttatcactgagaacagcctggtggct
gctggccatgactgctatccagtactttactcttatgttgaagctcaggggactttgagt
tttgggggaaaacttgatatccccaagcagagttcccagagagggatgactgcacgagag
agatttcaaaacctggacaagaaggccagctctgataccaacaacgttaccctggactcc
ttacacaagaacagcatcagccaaatatctgtgctgagtggtgggaaggcaaagtgttcc
aagttctgtaccactggcttagatggagggatgtgcatctgggacgtcaagatcctggaa
tctgcaatgaaagatctgaagattaagtga
DBGET
integrated database retrieval system
