Xenopus tropicalis (tropical clawed frog): 448602
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Entry
448602 CDS
T01011
Symbol
actn2
Name
(RefSeq) alpha-actinin-2
KO
K21073
actinin alpha 2/3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
448602 (actn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448602 (actn2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
448602 (actn2)
04147 Exosome [BR:
xtr04147
]
448602 (actn2)
Membrane trafficking [BR:
xtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
448602 (actn2)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
448602 (actn2)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
448602 (actn2)
Exosomal proteins of colorectal cancer cells
448602 (actn2)
Exosomal proteins of bladder cancer cells
448602 (actn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_7
EF-hand_6
CAMSAP_CH
EF-hand_8
Nsp1_C
AIF-1
Motif
Other DBs
NCBI-GeneID:
448602
NCBI-ProteinID:
NP_001005053
Xenbase:
XB-GENE-489122
UniProt:
Q6DF05
LinkDB
All DBs
Position
5:41463869..41501447
Genome browser
AA seq
894 aa
AA seq
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MTQAVTNETYNYCYDEEEYMNQEEEWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTMIE
NIEEDFRNGLKLMLLLEVISGERLPKPDRGKMRFHKIANVNKALDFIASKGVKLVSIGAE
EIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNIQNFHTSW
KDGLGLCALIHRHRPDLIDYSKLNKDDAVGNINLAMDVAEKYLDIPKMLDAEDIVSTAKP
DERAIMTYVSCFYHAFAGAEQAETAANRICKVLAVNQENERMMEEYERLASELLEWIRRT
IPWLENRTSEKTMQAMLKKLEDFRDYRRKHKPPRVQEKCQLEINFNTLQTKLRISNRPAF
MPSEGKMVSDIANAWQRLEQGEKGYEEWLLTELRRLERVEHLAEKFRQKASLHESWTAGK
EQLLLQKDYETASLTEVRALLRKHEAFESELAARQDRVEQIAAIAQELNELDYYDAARIN
ERCQKICDQWDRLGTLTQKRREALERTEKLLETVDQLHLEFIKRAGPFNIWMEGAMEDLQ
DMFIVHNVEEIQKLITAHEQFKATLPEADSERQAILGIQNEVEKVIQSYNIKISSHNPYS
SITLDEIRTKWEKVKQLVPIRDQTLQEELARQQNNERLRRQFAGQANVIGPWIQKQMEEI
GRSCIDFTGTLEDQMNSLKMLEHNIVNYKHNVDKLEGDHQMIQESLIFDNKHTNYSMEHI
RVGWELMLTTVARTINEVETQILTRDAKGITQEQINVFRSSFNHFDKKKNGLMEHDDFRA
CLISMGYDLGEAEFARIMALVDPSGIGTISFQSFIDFMTRETAETDTSEQVIAAFRILAA
DKPYILPEELRRELPPEQAQYCLSKMPTYTGPGAVPGALDFTCFSSALYGESDL
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagcagtgaccaatgaaacatacaactattgctacgatgaagaggagtatatg
aatcaagaggaagaatgggatcgggacatgcttttggatccagcatgggaaaagcagcag
agaaagacatttacagcctggtgcaattcacatctaaggaaagcaggaacaatgattgag
aacattgaagaagatttcagaaatggcctaaagctgatgcttcttttagaagtaatatca
ggggagcggctgccgaaaccagacagaggaaagatgcgtttccataaaattgccaatgtc
aacaaagctttggacttcattgccagcaaaggagtaaaactagtatcaattggagcagaa
gaaattgttgatgggaatgtaaagatgacactgggcatgatctggaccataatccttcgc
tttgctattcaggacatatctgtagaagaaacctctgccaaagaaggtttgctattatgg
tgccagcggaagactgctccgtatcgcaatgtgaacattcagaatttccacacaagctgg
aaagatggtcttgggctgtgtgcccttattcacagacatcggcctgacctcattgactac
tccaaactaaataaggatgatgctgttgggaacattaacctagctatggatgtggcagaa
aaatacctggatattccgaagatgttggatgcagaagatattgtcagtactgccaaacca
gatgaaagagctattatgacttatgtgtcgtgcttttaccatgcattcgctggagctgaa
caggcagaaacagctgctaatcgaatctgtaaagtcctggccgtgaatcaagaaaatgaa
agaatgatggaagagtatgagcgacttgcaagtgagctactagaatggattcgacggact
attccctggttggaaaaccgcacatccgagaagaccatgcaagccatgctgaagaaactg
gaggatttcagagattatcgtcgcaaacacaagccaccaagggtgcaggagaaatgtcag
ctagagatcaactttaataccttacagacaaaactaaggataagcaacagaccagcattc
atgccatccgagggaaagatggtttccgatattgcaaatgcctggcaaaggctggagcag
ggtgaaaagggatatgaagagtggctgctgactgagctgagacgacttgaaagagtggaa
cacttggctgaaaaatttaggcaaaaagcctctttgcatgaatcctggactgctgggaaa
gagcaactgctgttacagaaggactatgagacggcatctctaacagaagtgcgcgccctg
ctgaggaaacatgaggcgtttgagagcgagctggctgcacgccaggaccgggtagaacag
attgctgccattgcacaggagctcaatgagcttgattattatgatgcagctagaattaat
gaacgatgtcagaagatttgtgaccaatgggatcgcctcggaaccttaacacagaaaaga
agggaagcccttgagcgaactgagaagctcttagagacagttgaccaactgcatttagaa
ttcattaagagagctggaccttttaacatctggatggagggagcgatggaagatctacag
gacatgttcattgtgcacaatgtggaagaaattcagaaattgatcacagcccatgaacaa
tttaaagccacactgcccgaagcagacagtgaacgacaggctatactgggcatccaaaat
gaagtggaaaaagtgattcagagctataacataaagatatcttctcacaatccttacagc
tccatcacactggatgagattcgtaccaagtgggaaaaggtgaaacagctggtgcccata
agagatcagacattacaagaagagttggcgcgtcaacagaataatgaacgtttgcgcaga
cagtttgctggacaagccaatgttataggcccttggatacaaaaacagatggaggaaatt
ggacgcagctgcattgactttacaggcaccctggaagatcagatgaacagtctgaagatg
cttgaacacaacattgtaaattacaagcacaatgtagacaagctggaaggtgatcaccag
atgatccaggaatccctcatatttgataacaagcacaccaattattccatggagcacatc
cgtgtgggctgggagctaatgctaactacagtagctagaaccatcaacgaggttgaaacc
cagatccttacacgtgatgctaaaggtatcacccaggagcaaatcaatgtattccggtct
tcatttaaccactttgacaagaagaagaatggactgatggaacatgatgacttcagagcg
tgtttaatttcaatgggttatgatctgggagaagcagaatttgctcggattatggcactt
gtggatcccagtggaataggaaccatctcttttcagtcttttattgatttcatgaccagg
gagactgcagaaacggacacctccgagcaggttattgctgccttcaggatccttgctgct
gacaagccctatatattaccagaagaactccgcagggaactccctccggaacaagctcaa
tactgcttatccaaaatgcccacttacaccggccctggggctgtccctggagcacttgac
tttacatgtttttcctcagcgttatatggagaaagtgatctgtag
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