Xenopus tropicalis (tropical clawed frog): 448671
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Entry
448671 CDS
T01011
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03013
Nucleocytoplasmic transport
xtr03015
mRNA surveillance pathway
xtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
448671 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
448671 (ncbp2)
03015 mRNA surveillance pathway
448671 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
448671 (ncbp2)
03041 Spliceosome [BR:
xtr03041
]
448671 (ncbp2)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
448671 (ncbp2)
Spliceosome [BR:
xtr03041
]
Common components
Common spliceosomal components
Cap binding complex
448671 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
448671
NCBI-ProteinID:
NP_001006879
Xenbase:
XB-GENE-1005786
UniProt:
Q6DES0
LinkDB
All DBs
Position
5:complement(106057538..106061287)
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AA seq
153 aa
AA seq
DB search
MALGALKSDSYVELSQYRDQHFRGNRSDQECLLKHSCTLYVGNLSFYTTEEQIHELFSKS
GDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRTDWDAGFKEGR
QYGRGKSGGQVRDEYRQDYDAGRGGYGKIVQSI
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggctctgggtgccctaaagagcgactcgtacgtggagctgagtcagtatcgggaccag
cacttccggggaaaccggtctgatcaggagtgtctgctaaagcacagttgcaccttgtat
gtaggaaacctgtcattttatacaacagaggaacaaatccatgaactgttcagcaagagc
ggcgatgttaaaaaaattgttatggggctcgataagattaagaaaacagcctgtggattc
tgttttgtagaatactatacaagaacagatgcagaacaagcaatgaggtttatcaatggt
acacggctagatgatcgaataatccgaacagactgggatgcaggatttaaggaagggaga
cagtatggacgtgggaaatcgggtggtcaggtcagagatgagtaccgccaagattatgat
gcaggaagaggaggctatggtaaaattgttcagtcgatatga
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