Xenopus tropicalis (tropical clawed frog): 448750
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Entry
448750 CDS
T01011
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
448750 (hps1)
Membrane trafficking [BR:
xtr04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
448750 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
SMG1
DUF2535
CTF_NFI
DUF4694
Motif
Other DBs
NCBI-GeneID:
448750
NCBI-ProteinID:
NP_001006903
Xenbase:
XB-GENE-977903
UniProt:
Q6DJS6
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All DBs
Position
7:complement(34864161..34955675)
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AA seq
669 aa
AA seq
DB search
MKCVLIASEGAEVLFYWADEEFEKNLQSKYDYTEEQQPPNYGDSINTLFAPLIISCVTIM
EKINDTYTCFTTEKGHLCVLHMFGECLYIAVNGDETENEDDLRRKLYVLKRLCEVHFGLV
TFDSHLIKKELRPADSEQRNLVWKTFQSLLLTYSRLRNEDQSFAVEAVERLIHPKLCEQC
IEFLEKQIVHFINSSSERGAEEVLHAFVLVNTKLLALFSSRNASSLRPADLLSLILIVQD
LYPNFSTQERNVEENEDNAPSEEYYTPDPSPNNRSLSGGSWVDDDSPALSYVDPEIQIAE
DSLKTLVGDIPESTNTRRVFLDATLKEGYCPMMPHSMYCLPLWPGISLVLLTKLSGSHIA
LSLYQLLDGFSMLEKKLTEGGDIHQILRSHPIAADLKQRTDRFVKSLGGRDSQLQNCWLE
FKSKAFSRQDTGTVPELLHACRNMNRQLCSVYRQLFLVSLMSGTHSLSLNMQSKVRKLVQ
GKLTDWQEFLLVKSKRNTTMVNYLEDFPGLIHFIYVDRTVGQMVAPSINTDSKTSSELGT
GLLASFIKNKVWSFIGLSRRYLQKGYTTLTLRDGDYYCCYFLWFENEAGDKLEIIEVPVL
GDDSAPIGMLAGEYYRKLLRYYSKNHQTELVKCYELLTLHLGIIPPEFVIQQCHDLARKL
WEPSRIPLL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgtacttattgcctccgagggagctgaagtcctgttctactgggcagatgaa
gagtttgagaagaacctgcagagcaaatatgattatactgaggaacagcagccaccaaac
tatggagacagcattaatactcttttcgctcctttaatcatctcttgtgttacaataatg
gagaagattaatgatacctatacatgtttcaccactgaaaaaggtcacctctgcgtcctt
cacatgtttggagaatgcctctacattgcagtaaatggtgatgaaactgaaaacgaggac
gacctgcgcaggaaattgtatgtccttaagagactctgtgaggtgcattttggtctggtc
acgtttgacagccatttgattaagaaggaactgcgccctgcagattctgaacagcgcaat
ctagtatggaagacctttcagagcttgcttctgacatacagtcgactgcgaaatgaggac
cagagctttgctgttgaggcagtggagcgcctgattcacccaaagctctgtgagcagtgc
atcgagttcctggagaaacagattgtccatttcattaacagcagcagtgagcggggggca
gaggaggtcctgcatgcttttgtactggtcaacacaaaacttctggctcttttctcaagt
cgaaacgccagttctttgagacctgcagatctactctccttaattctcatagttcaggat
ttgtatcccaacttcagtactcaagagcgaaatgtggaggagaatgaagacaatgcgcct
tcagaggagtattacaccccagatccatcgcccaataacaggagtttaagtggtggcagc
tgggtggatgatgattcccctgcacttagttatgttgatcctgaaatccagattgctgaa
gacagtttgaaaacccttgtgggagacatccctgaatctactaacacaagaagagttttt
ttggatgcaaccctaaaagaaggctattgtcccatgatgccacattccatgtactgctta
ccactttggccgggaatatccctggtcctgctgactaagttgtcaggcagccatattgcc
ctctctctgtatcagctcctagatgggttcagcatgctggaaaagaagcttacagaggga
ggggatatccaccaaattttacgatcacacccgattgctgctgacttaaaacaaagaaca
gaccgatttgtaaagagtcttggtggtcgcgactcacagttacagaattgctggctggaa
ttcaagagcaaagcattctcaaggcaagacacagggactgtaccagagctccttcatgct
tgtaggaacatgaaccgacagctgtgctctgtgtatcggcagctatttctagtgtctctg
atgagtggaacacattccctctccttaaatatgcagtccaaggtccggaaactggtccag
gggaagctgactgactggcaggagtttctgctggtgaagagtaaaagaaacactacgatg
gttaattacttggaagattttccaggcttgatacattttatctacgtggatcggactgta
ggccaaatggtggccccctctataaatactgatagcaaaacatcttccgagctgggaact
ggattgttggccagttttattaaaaataaggtttggtccttcattggtttgtcacggaga
taccttcagaaaggatacacaacgctaactctgcgagatggggactattattgctgctac
ttcctctggtttgagaatgaagcaggtgataaacttgaaatcattgaggttcctgtttta
ggagatgattctgctcctataggaatgctggcaggcgaatattacaggaaactgcttcgc
tactacagcaaaaaccaccagacagagctggttaaatgctatgaactgctcaccctgcac
ttgggcatcatccctccagagtttgtgatccagcagtgccatgatctagcccgcaagcta
tgggaaccatcccggatccctcttctatag
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