Xenopus tropicalis (tropical clawed frog): 448766
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Entry
448766 CDS
T01011
Symbol
srsf1
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03040
Spliceosome
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
448766 (srsf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
448766 (srsf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
448766 (srsf1)
Spliceosome [BR:
xtr03041
]
Common components
Common spliceosomal components
SR proteins
448766 (srsf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
448766
NCBI-ProteinID:
NP_001006919
Xenbase:
XB-GENE-486875
UniProt:
Q6DII2
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All DBs
Position
2:76104964..76111058
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AA seq
267 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGAGGRGGGGGGGGGGGGGGGGGGGGGG
GGGGGAPRGRYGPPSRRSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVE
FVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNS
RSRSYSPRRSRGSPRYSPRHSRSRSRT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggcggcgtgattagggggccggcgggtaacaacgattgccgtatctatgtt
ggcaatctgccgccagacatccgcaccaaggacattgaggacgttttctacaagtatggg
gccattcgggacatagacctaaagaaccgcagagggggcccgccattcgcctttgtggaa
ttcgaagatccaagggatgcagaagatgctgtctatggtagagatggctatgattatgat
ggctatcgcttgcgtgttgagtttccaagaagtgggcgaggagctggaggcagaggtggt
ggtggtggtggcggcggcggaggaggaggtggtggaggcggcggcggcggtggtggtggt
ggcggcggaggaggagctccccgagggagatatggacctccatcaagacgttcagaatac
agagtggttgtgtcagggttgcctccaagtggcagctggcaggatttaaaggatcacatg
cgtgaagcaggtgatgtatgttatgccgatgtgttccgagatggtactggagttgtggag
tttgtgaggaaagaagatatgacatatgcagtacggaagctggataacactaaatttagg
tctcatgagggagagactgcctacattcgtgttaaggtagatggtccaagaagtcccagc
tatggaagatcgcggtcacgcagccgcagtcgtagcaggagccgtagtagaagcaacagt
cgcagccgaagttactctccaagaagaagccgtggttctccacgctactctcctcgccac
agcagatctcgctctcgtacataa
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integrated database retrieval system