Xenopus tropicalis (tropical clawed frog): 493219
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Entry
493219 CDS
T01011
Symbol
tub
Name
(RefSeq) TUB bipartite transcription factor
KO
K19600
tubby and related proteins
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
493219 (tub)
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
493219 (tub)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
493219 (tub)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Other domain-containing proteins
Tubby family proteins
493219 (tub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
Tub_N
Motif
Other DBs
NCBI-GeneID:
493219
NCBI-ProteinID:
NP_001007493
Xenbase:
XB-GENE-962281
UniProt:
Q68FB3
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All DBs
Position
4:3531764..3586524
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AA seq
454 aa
AA seq
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MTSKHQSDWIPYSVLDDESSSLRQQKLDRQRALLEQKQKKKRQEPLMVQSNVDSRARGRR
MKQSEEQAPLVESYNSSNSSTIYHGIDGPAAFQDEASSPGSQVQILTVGQSGHEEEATET
AASGQQQGKQDLRITMQKKGISSSMNFDEEEDEEDEDSSSSSQLNSSTRPGSATSKKSSK
ETVSAPSPPSNEPSIDVEDLEEFSMRPAPQGVTIKCRITRDKKGMDRGMYPTYYLHLERE
DGKKVFLLAGRKRKKSKTSNYLISIDPTDLSRGGESFIGKLRSNLMGTKFTVYDNGVNPG
KTTSSLEASNLRQELAAICYETNVLGFKGPRKMSVIIPGMNMDHERVSIRPRNEHETLLS
RWQNKNTESVIELHNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHDNDPDYIVMQFGR
VAEDVFTMDYNYPMCALQAFAIALSSFDSKLACE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacttctaagcaccagtcagactggatcccttacagtgttttagatgatgagagcagc
agtttgcggcaacagaagctcgacaggcagcgggcattattggaacagaaacagaagaag
aagcgccaggagcctctcatggtccaatcaaacgtagacagtcgggcgcgcgggcgcagg
atgaagcagtcggaggaacaagcgcccctagtggaatcctataacagcagcaacagcagc
acaatctaccatggcatcgatggtccggccgcttttcaagatgaagcttcgagccccggg
agccaagtccagattctgacggtggggcagtcgggccatgaagaggaggctacggagacc
gcggccagtggccaacagcagggcaaacaggacctgcggatcaccatgcagaaaaagggg
atatcgagcagcatgaactttgatgaggaggaggatgaagaagatgaagacagttcaagt
tcttctcagctgaacagcagcactcggcccgggtcggccacgagcaagaaatccagtaag
gagacagtgtcggctcccagccccccctccaatgaaccctccatcgatgtagaagacctg
gaggaattctctatgcggccggccccacagggagtgacgatcaaatgcagaatcacgagg
gacaagaaggggatggacagagggatgtaccccacttattacctccatctggaacgggag
gacggcaaaaaggttttcctattggccggcaggaagcgaaagaaaagcaaaacttccaat
tacctcatttccattgacccgacggacctttcccgcgggggggagagctttattggcaaa
ctcagatcaaacctgatgggcacaaagtttaccgtttacgataacggggtgaatccgggc
aaaaccacctcgagtttggaggccagtaacctgcgccaggagctcgccgccatctgctac
gagacaaacgtcttagggttcaaagggccccggaagatgagtgtgattattcccgggatg
aatatggatcatgagcgagtgtctatccggccccggaacgaacacgagacgctgctctct
cggtggcagaacaagaacacggagagcgtcatcgagctgcacaacaagacccccgtgtgg
aacgacgacacccaatcgtacgtgctgaacttccacgggcgggtcacgcaggcgtccgtc
aagaatttccaaatcatacacgacaatgacccggattatatcgtgatgcagttcggccgc
gtggcggaggatgtgtttacaatggactataactaccccatgtgtgcgttacaagcattc
gccatagccctgtccagcttcgatagcaaactggcctgcgagtga
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