Xenopus tropicalis (tropical clawed frog): 493228
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Entry
493228 CDS
T01011
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
493228 (sox3)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
493228 (sox3)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
493228
NCBI-ProteinID:
NP_001007502
Xenbase:
XB-GENE-484815
UniProt:
Q68FA4
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All DBs
Position
8:complement(55346463..55348089)
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AA seq
307 aa
AA seq
DB search
MYSMLDTDLKSPVQQSNAPNGGPGTPGGKGNASIPDQERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLK
KDKYSLPGNLLAPGVSPVASSVGVGQRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSP
QMQQIQHRYDMGGLQYSPMMSSAQTYMNAAASTYSMSPAYNQQSSTVMSLGSMGSVVKSE
PSSPPPAITSHTQRACLGDLRDMISMYLPPGGDASDPSSLQSSRLHSVHQHYQSAAGPNG
TVPLTHI
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgttggacacagacctcaagagcccggtgcagcagagcaatgcaccgaac
gggggccccggcaccccagggggcaaaggcaatgcttctatcccggatcaggagcgggtg
aaacggccgatgaacgcgtttatggtgtggtcccggggccagcggagaaagatggcccag
gagaaccccaagatgcacaactcggagatcagtaagaggctgggggctgactggaagttg
ttgagcgattccgagaaaagacccttcatcgacgaggccaagaggctgagagcagtccat
atgaaggagtacccggattacaagtacagaccccgcaggaagaccaagaccctcctgaaa
aaggacaagtattccctgcctggcaaccttttggctccaggagttagcccggtggccagc
agtgttggtgttggccagaggatagacacttatgctcacatgaatggctggactaatggg
gcttattccctgatgcaggaccagctgggctacagccagcaccctgggatgaacagcccc
cagatgcagcagatccagcacaggtatgacatgggcggcctgcagtacagcccaatgatg
tcctccgcgcaaacttacatgaatgctgctgcctctacctatagcatgtcccctgcctac
aaccagcagagctccacggtcatgagtttgggctctatgggctcagtggtgaaatccgaa
cccagctccccccctccagccatcacctcccacacgcaaagggcctgcctgggagacctg
cgagatatgatcagcatgtacctgcccccaggtggagatgccagcgacccttcttccctt
cagagtagcagactgcacagtgtacaccaacattaccagagcgcagctggccccaatggc
actgtaccgctcactcacatataa
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