Xenopus tropicalis (tropical clawed frog): 493265
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Entry
493265 CDS
T01011
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00260
Glycine, serine and threonine metabolism
xtr00630
Glyoxylate and dicarboxylate metabolism
xtr00670
One carbon pool by folate
xtr01100
Metabolic pathways
xtr01200
Carbon metabolism
xtr01230
Biosynthesis of amino acids
xtr01240
Biosynthesis of cofactors
xtr04981
Folate transport and metabolism
Module
xtr_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
493265 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
493265 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
493265 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
493265 (shmt2)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
493265 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
493265
NCBI-ProteinID:
NP_001007880
Xenbase:
XB-GENE-957476
UniProt:
Q68EQ3
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Position
2:139769917..139802064
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AA seq
496 aa
AA seq
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MLTFSLRRLAQPLRSCCHVRSQHSQAWTQAGNQVWTGQESLAEGDPEMWDLVQKEKDRQC
RGLEMIALENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDKIELLCQQRALDAFD
LNPEKWGVNVQPYSGSPANFAAYTAVLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSI
YFESMPYKLNPATGLIDYDQLEMTARLFRPKLIIAGTSAYARLIDYARMRKVCDEMKAYL
LADMAHISGLVAAGVIPSPFEHADIVTSTTHKTLRGARSGLIFYRKGVKSVDKKTGKDVL
YNLEDKVNFSVFPSIQGGPHNHAIAAVAVALKQASSPMFREYAVQVLKNAKSMAAALLSK
GYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGGLRLGA
PALTSRNFKEADFEKVVHFIDEGIRIGLDVKRKTNKLQDFKNFLLEDHETVNRIADLRKQ
VEQFARSFPMPGFDER
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgttttctttacggcgcttggcacagcccctgcggagttgctgccatgttcgc
agtcagcacagccaagcttggacacaggctggaaaccaagtctggactggacaggaaagt
ctggcagagggtgaccctgagatgtgggaccttgtacagaaagagaaggataggcaatgc
cgagggctggagatgattgccttagagaatttctgtagccgggcagccttggaagccctt
ggttcctgcctcaacaacaagtattctgagggctacccagggaagagatattatgggggt
gcagaggttgtggacaagattgaattactgtgccagcagcgggctttggatgcctttgac
ttgaatccagaaaaatggggagttaatgtacagccatattcaggctctccagccaacttt
gcagcatacacagctgttctacagccacacgatcgcatcatggggctagaccttcctgat
ggaggacatctgacccacgggtacatgtctgatgtgaagcgcatttctgctacatctata
tactttgaatccatgccttataagttaaatccagcaacagggttaattgattatgatcag
ctggagatgactgctcgcctcttccgaccaaagcttatcattgctggaaccagtgcctat
gcacggctaattgactatgccaggatgagaaaggtatgtgatgaaatgaaagcctacctt
ctggctgatatggctcatatcagtggacttgtagcagctggcgtgatcccatctcccttt
gaacatgctgatattgtcacctcaacaacacacaagactttgcgaggggcaaggtctggg
ttaatattctaccgaaaaggtgtaaaatctgtggataagaaaactggaaaagatgtactt
tataacttggaagacaaagtcaacttttcagtgtttccttcgatccaaggggggcctcac
aatcatgcaattgcagctgttgccgtggctttaaaacaggccagttctcctatgttccgt
gaatatgcagtgcaagtcctgaagaacgccaaatccatggccgccgctctgctaagcaag
ggttacacactggtgtcaggagggacagataatcacctggttttagtagacctgagaccc
aagggcattgatggcgcaagagcagagagggtgctggagcttgtgtcaataaccgcaaac
aagaacacatgcccgggggacaagagcgcacttaccccaggagggttacggctaggtgcc
cctgcgctgacatctcggaatttcaaggaagccgactttgaaaaagtggttcatttcatt
gatgaaggtatccgcatcggacttgatgttaagcgcaaaacaaacaaacttcaagacttt
aagaactttcttcttgaggaccacgaaacagttaatcggatagcagacctgcgtaagcaa
gtggagcagtttgcccgttcttttcccatgcctggatttgatgagcgttga
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