Xenopus tropicalis (tropical clawed frog): 493268
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Entry
493268 CDS
T01011
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04136
Autophagy - other
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
493268 (atg4c)
04136 Autophagy - other
493268 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
493268 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
493268 (atg4c)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
493268 (atg4c)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
493268 (atg4c)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
493268 (atg4c)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
493268 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
493268
NCBI-ProteinID:
NP_001007883
Xenbase:
XB-GENE-941086
UniProt:
Q68EP9
LinkDB
All DBs
Position
4:complement(85427856..85452563)
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AA seq
450 aa
AA seq
DB search
MEASGTDDVEKLKSKFLSAWHNMKYSWVLKTKTYFKRNSPVFLLGKCYHFKYEDSSVTSD
GGSNSGSESKEDLSGNVDEFRKDFISRIWLTYREEFPQIETSSWTTDCGWGCTLRTGQML
LAQGLIVHFLGRDWTWTEALDIFSSESEFWTANTARKLTPSLETSFSENNECVSSNKQPL
HNCDKKSNSEDFHQKIISWFADYPLAYFGLHQLVKLGKNSGKVAGDWYGPAVVSHLLRKA
IEESSDPELQGITIYVAQDCTIYSADVYDLQCNKGTEKAVVILVPVRLGGERTNMEYFEF
VKGILSLEFCIGIIGGKPKQSYYFVGFQDDSLIYMDPHYCQSFVDVSVKNFPLESFHCPS
PKKMSFKKMDPSCTIGFYCRNAREFEKAAEELTKVLKSSTKQNYPLFTFVNGHAQDFDFV
CTPVYDQNDLFTEDEKKRLKRFSTEEFVLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaagccagtggcacagatgatgtggagaaattaaaatccaagttcttatctgcatgg
cataacatgaaatatagttgggtactgaaaacaaaaacctacttcaagagaaattcacca
gtattcttacttggcaaatgctaccattttaaatatgaagattctagtgtaacatctgat
ggaggttccaattctggctctgaatcaaaagaagacctttctggaaatgtggatgaattt
cggaaggatttcatttccagaatatggcttacttatagagaagaattcccccaaatagaa
acatcgtcatggacaacagattgtggatggggctgcacattacgtactggtcaaatgttg
ctggcacagggattgatagtacacttcctgggacgagactggacttggacagaagcactg
gacattttctcttctgaatcggaattttggacagcgaacactgcaagaaaacttactcca
tctcttgagacatctttctctgaaaataatgaatgtgtgtcatcaaacaagcagccattg
cacaactgtgataagaaaagtaattctgaggactttcaccaaaaaataatatcctggttt
gcagactacccactggcctattttggtttacatcaacttgtaaagcttgggaaaaattcg
ggcaaagtggctggggactggtatggtccagcagttgtttctcatcttttgaggaaagcg
attgaagagagctcagatccagaactgcagggaataacaatttatgttgctcaggactgc
actatctacagtgctgatgtctatgacctgcagtgtaataagggtaccgagaaggctgtt
gtaattctagttcctgtgagacttgggggtgaaaggaccaatatggaatattttgagttt
gtaaagggaattctaagccttgaattctgtattggaattatcggtggcaaacccaagcag
tcctattactttgttggatttcaagatgacagtttgatttacatggatcctcattactgc
caatcttttgttgatgtcagcgtaaagaatttccctcttgagtctttccattgcccttct
cctaagaagatgtctttcaagaaaatggatcccagttgcacaattgggttttactgtagg
aatgctcgagaatttgaaaaggcagcggaagaacttacaaaggtgctgaaatcttcaacc
aagcagaattatcctttatttacctttgtaaatggacatgctcaagactttgattttgtc
tgtactccagtctacgatcaaaatgaccttttcacagaggatgaaaagaaaagattaaaa
agatttagcacagaggagtttgtcttgctctaa
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