Xenopus tropicalis (tropical clawed frog): 493302
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Entry
493302 CDS
T01011
Symbol
pcna
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03030
DNA replication
xtr03410
Base excision repair
xtr03420
Nucleotide excision repair
xtr03430
Mismatch repair
xtr04110
Cell cycle
xtr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
493302 (pcna)
03410 Base excision repair
493302 (pcna)
03420 Nucleotide excision repair
493302 (pcna)
03430 Mismatch repair
493302 (pcna)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
493302 (pcna)
09144 Cellular community - eukaryotes
04530 Tight junction
493302 (pcna)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xtr03032
]
493302 (pcna)
03400 DNA repair and recombination proteins [BR:
xtr03400
]
493302 (pcna)
DNA replication proteins [BR:
xtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
493302 (pcna)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
493302 (pcna)
MMR (mismatch excision repair)
Other MMR factors
493302 (pcna)
TLS (translesion DNA synthesis) factors
Other TLS factors
493302 (pcna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
AMA-1
Motif
Other DBs
NCBI-GeneID:
493302
NCBI-ProteinID:
NP_001007921
Xenbase:
XB-GENE-972522
UniProt:
F6RT15
LinkDB
All DBs
Position
3:123023407..123027549
Genome browser
AA seq
261 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLIDEACWDITSSGISLQSMDSSHVSLVQLTLRSDGFDTY
RCDRNQSIGVKMSSMSKILKCAASEDIITLRAEDNADTVTMVFESPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVIKMPSGEFARICRDLSQIGDAVVISCAKDGVKFSASGELGTGNV
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIEDEEAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagctcgcttggtgcagggttccatcctgaagaaagtgctggaggccctgaag
gacctgatcgatgaggcgtgctgggacatcacatcgagcggcatcagcttgcagagcatg
gactcctcgcacgtctcgttggtgcagctcactctgcgatcggacggctttgacacctac
aggtgcgatcgcaatcaatccatcggcgtcaagatgagcagtatgtctaagatcttgaag
tgtgctgcaagtgaagatatcattactctgagggcagaagacaatgctgatacagttaca
atggtgtttgagtcgccaaatcaagagaaagtttctgactatgaaatgaagctaatggac
cttgatgtggagcagctgggcattcctgaacaagagtacagctgtgtaataaagatgcca
tctggtgaatttgcacgcatctgcagagatctaagccagattggtgacgcagttgttatt
tcttgtgcaaaggatggggtaaagttctctgcaagtggagagctgggcactggaaacgta
aagctgtcacaaacttcaaatgtggataaagaggaggaagctgttacaatagaaatgaat
gagccagtacagcttacatttgctttgcggtacctgaacttctttaccaaagctacaccc
ctgtccccaacagttacactcagtatgtctgcagatatcccacttgttgtggaatacaaa
atcgcagatatgggtcatgtgaaatattacctggctcccaagattgaagatgaagaagct
tcataa
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integrated database retrieval system
