Xenopus tropicalis (tropical clawed frog): 493397
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Entry
493397 CDS
T01011
Symbol
utp25
Name
(RefSeq) digestive organ expansion factor homolog
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xtr03009
]
493397 (utp25)
Ribosome biogenesis [BR:
xtr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
493397 (utp25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
493397
NCBI-ProteinID:
NP_001008035
Xenbase:
XB-GENE-1002187
UniProt:
Q642T7
LinkDB
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Position
5:15266310..15279000
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AA seq
765 aa
AA seq
DB search
MGKRRKPRREEAGSALSKKQKKHLKEFGEQHPFYDAVSKKQETTQVVQLPESSEDESRSE
SEAESDPEPVNMYHKLLATLNTVSDEEEEESDDEEEEALEEAEEEDEAEEVGEESEAEDE
DNEDESDGEGHGQMDELPVEAEKAGDNEEEERAGDPAAEEAGEFTDAKHESKFSLETNFM
DEDNEDSKDESVPCPTVATEDPFVQHVGRELEEQDISKIGTNPKKASLKWPALGQLGVSS
SLPQLQPLKVEKETDLQKLYLHKPLFSTWPKVNSPFLSVDKEQNFTPLQRELFSIMNSYR
DLFFPARSPTAQGEEIRHVYCLHALNHVLKANAQVLNNNSQKRDQKPGLDEEDLRDQGLT
RPKVLIVVPFRESALRIVQILISLMEVGGRKVDVSNKKRFKEEFGSEPEDRPPNLKRPED
YEAVFAGNIDDHFRIGVAILQKSMRLYSPFYSSDIIIASPVGLRTIIGSEGEKKRDFDFL
SSIEVLILDQADLYLMQNWEHVLHLMAHLNLQPTDSHGVDFSRVRMWNLSNWAKYYRQTL
LFSSLQEPQINSIFNKHCFNYCGQVAVRNMPVTGSISHVVVQLPHVFQRLEADSLLTVID
ARFEFFTSKILPQYRDAIMSHTLIYIPSYFDYVRLRNYFKKEELNFTHICEYTNRSGVSR
ARQFFLKGERQFLLVTERFHFYKRYTLKGIRNLIFYELPTYPHFYSEVCNMMKAWHRGEE
ATWTCTVLYSKYDAQRLAAVVGAERAAQMLQSKKNVHLFVTGENG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcggaggaagccgcggagggaggaggctggcagcgccctgagcaagaaacag
aagaagcacctgaaggaatttggggagcagcaccccttctatgatgcagtctccaagaaa
caagaaacaacccaggtggttcaactgcctgagagttcggaggatgaatcccgaagtgag
agcgaggcagagagtgatcccgagccggttaacatgtaccacaagctgctcgccaccttg
aatactgtgtctgatgaagaggaagaagaaagtgatgatgaggaagaagaagccctagaa
gaagcagaagaggaagatgaggcagaagaggtgggtgaggagtcggaagcagaggatgag
gataatgaagatgagagtgacggggaaggccacgggcaaatggatgagttacctgttgag
gcggagaaagcgggagacaatgaggaggaggagagagctggggatccagctgcagaagaa
gccggggaattcactgatgccaaacatgaatcgaagttcagtttagaaaccaattttatg
gatgaggacaatgaggattccaaggatgagagtgtcccctgtcccacagtggctacagaa
gacccatttgtacagcatgttggcagggaactggaagagcaagacatcagtaagatagga
acaaatcctaaaaaagcatcactcaagtggccggccttgggtcagctgggtgtctcgagc
tcccttcctcagctccagcccctaaaagtcgagaaggaaactgacctacagaagctgtat
ttgcacaagccgctcttctccacgtggcccaaagtgaacagtcccttcctgtctgttgat
aaggaacagaatttcacccccctacagagagagcttttcagtatcatgaactcctacagg
gacttgttcttcccggcacggagcccaacagcgcagggcgaagagatcagacatgtgtac
tgtctccatgcgctgaaccatgttctgaaagcaaacgcccaggtattgaataacaactct
cagaaaagagatcaaaaacccggactggatgaagaagacctaagggaccagggcctgacc
agaccaaaggtcctcattgttgtgccgttccgagaatccgccttacgcatagtgcagata
ttaataagcctgatggaggtcggaggcagaaaagtcgacgtgagcaataagaagcggttc
aaggaagaatttggatcggaacccgaagacagacccccaaacttgaagaggcctgaagat
tatgaagctgtgtttgctggaaacattgacgatcactttaggataggagtggccatcttg
cagaagagcatgaggctgtactctccattctactcctcggacatcattatcgcctccccc
gttggcttgcgtaccatcattggcagcgagggggagaagaaaagggatttcgatttcctg
tcctccatagaggttctcattctggatcaagcagatttgtacctgatgcagaactgggag
catgtgttgcacctgatggctcaccttaacctgcagcctacagactctcacggggttgat
ttctctcgtgtccgcatgtggaacctcagcaactgggccaagtactatcggcagacgctg
ctgttcagctccctgcaggagccccaaataaactctatattcaacaagcattgctttaat
tactgcgggcaggtggcagttaggaacatgcccgttactggctctatcagtcatgttgtg
gtccagctcccacacgtcttccagagattagaggcagacagcctgcttactgttatagat
gcaaggtttgagttctttaccagcaagattctgccgcagtatcgagatgccattatgtct
catacgctcatctatatcccttcctacttcgattacgtgcgactacggaactacttcaag
aaggaagagctgaacttcacgcacatctgcgaatacacaaacaggtccggagtctccaga
gcgcggcagttcttcctgaagggggagagacagtttctgcttgtcactgagaggtttcac
ttctacaagagatacacattgaaaggtatcagaaaccttatcttctatgagctcccaact
tatccccatttctacagtgaagtgtgcaatatgatgaaggcatggcaccgcggggaggaa
gccacatggacctgcacggtgctgtactctaagtacgacgcccagagactggctgctgtg
gtgggggcagagcgggccgcacagatgctgcagtcgaagaaaaatgttcacctttttgtt
accggagaaaacggttaa
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