Xenopus tropicalis (tropical clawed frog): 493475
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Entry
493475 CDS
T01011
Symbol
irx2
Name
(RefSeq) iroquois-class homeodomain protein irx-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
493475 (irx2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
493475 (irx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
BUD22
Motif
Other DBs
NCBI-GeneID:
493475
NCBI-ProteinID:
NP_001008113
Xenbase:
XB-GENE-480618
UniProt:
Q66IK1
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Position
6:complement(67762099..67767288)
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AA seq
456 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEELARSSSGSAFSPYPGSAAFTAQAAT
GFSSPLQYSSDPAGFPSYMGSPYDAHTTGMTGALSYHPYGSAAYPYQLNDPAYRKNATRD
ATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRN
KSEDEDDDEGDGERVKEEQSEKAQDCNETSAEDEGISLHVDSLTDHSCSADSDGEKLPCR
ATDHLCESGSESKEKYDDDEDEEEGDEEDRVLPVKPATSSPLTGVEAPILNHQQDGSPRN
SNKTSLDNGMSPSSQTPASKPKLWSLAEIATSDHKHSNLGSVLSSATSSAAHNPSYPSSS
LLGRHIYYTSPFYSNYTNYGNFNALQSQGILRYSSAAVTANEGLNQTVLSTSSMHKHTSD
SVRTASNQLDQHYRPTNFESKKDPSEVCTVGVQPYP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcctcccggctccctagcgctctactcctgc
ccggcgtacggggcttcagcgctggccgcccccaggagcgaggagctggccaggtcatcg
tccggctccgccttcagcccctacccgggatcggctgccttcactgcccaagcggccacg
ggcttcagtagccccctgcagtactccagcgacccggccggattcccttcttacatggga
tcgccttacgatgcgcacacaactggcatgactggggccctcagctatcacccctatgga
agtgcagcttatccctaccaacttaatgatcctgcatacaggaaaaacgctaccagggac
gctaccgccaccctaaaagcctggctgcaggagcacaggaagaacccttaccccaccaag
ggggagaagatcatgctggccataatcaccaagatgaccttaacccaggtctcaacgtgg
tttgccaatgccagaaggagactaaagaaggagaataagatgacctgggctcccaggaat
aaaagcgaagacgaagatgatgatgaaggcgatggggaaagggttaaagaagaacaatcg
gaaaaggcccaagactgcaatgagacttcagcagaggacgaaggtatcagtctgcacgtt
gactccctgacagatcattcttgttcggctgattccgatggagagaagttgccttgtagg
gccaccgaccatctttgcgaatcggggtccgaatctaaagagaaatatgacgacgatgaa
gacgaagaggaaggtgatgaagaagacagagtgctcccagttaaacctgcaacctcatcc
ccactcacaggtgtggaagcaccaattctaaatcaccaacaggacggaagcccaagaaac
tcaaataagacaagtttggacaatggaatgtctccaagttcgcagacaccagccagcaaa
ccaaaactgtggtcactagctgaaatagccacctcggatcacaagcattctaacctgggt
tctgtcttatcttctgccacttcttccgcagctcacaatcccagctacccctcctcttca
ctcctagggaggcacatatattatacatcgcctttttatagcaattatacgaactatggg
aatttcaatgctctccaaagccaagggattctgcggtatagttccgcagcagtgactgct
aatgaaggactaaaccagactgtactaagcaccagctccatgcacaaacacaccagtgac
tctgtaagaacagccagcaaccagctagatcagcactacaggcccacaaacttcgaatct
aaaaaagatcccagtgaagtctgcacagtaggagtacaaccatacccatag
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