Xenopus tropicalis (tropical clawed frog): 493482
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Entry
493482 CDS
T01011
Symbol
pigm
Name
(RefSeq) GPI mannosyltransferase 1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
xtr01100
Metabolic pathways
Module
xtr_M00065
GPI-anchor biosynthesis, core oligosaccharide
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
493482 (pigm)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
493482 (pigm)
Glycosyltransferases [BR:
xtr01003
]
GPI-anchor biosynthesis
Core oligosaccharide
493482 (pigm)
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Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
MptA_B_family
Motif
Other DBs
NCBI-GeneID:
493482
NCBI-ProteinID:
NP_001008120
Xenbase:
XB-GENE-5730241
UniProt:
Q66IJ4
A0A8J1JQ71
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Position
6:69387186..69402377
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AA seq
419 aa
AA seq
DB search
MMKQAGILKIFLQHQFMFPTAFFLRSALVLFGVYQDQTMLVKYTDVDYHVFTDAAEYLTQ
GVSPYKRATYRYTPLLAWILTPNIYVTELYGKMLFVCCDLLAAYLIHRILVDRGIKDSAS
LYCAIWLFNPLPMVVSSRGNAESVLAVLVLSVLYYVQKRRLIKGALIYGLSVHMKIYPIT
YILPIALFFQKEDFYGSQEGKRVVSNLKYIRIFRNLLQRLLSRDILLFVTVSGVTFALLT
LFFYYRYGWEFLENTYLYHLTRRDIRHNFSPYFYMLYLTAENNNSFILGLAAFFPQLVLL
FVVSLAYFKDLPFCCFLHTAIFVSFNKVCTSQYFLWYLCLLPLVMPGLKMSMTNGICLII
LWFFSQAIWLVPAYFLEFEGQNTFLYIWCAGLLFLLINTVIIVQIISNYQLQSKKTKKT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcaagctggcatattaaagatttttttacagcatcagtttatgtttcccact
gcgttcttcttaagaagtgctcttgtgctatttggagtataccaagatcagactatgctg
gtgaaatatactgatgttgactatcatgttttcacagatgcagccgaatacctcactcag
ggggtctcaccatataagagagcgacatatcgttacactccattgttggcctggatcctt
acaccaaacatctatgtcacagagctctatggcaagatgttatttgtttgctgtgacctt
ttagcagcatacctgatccacagaatccttgtggataggggaattaaagactctgctagc
ctatactgtgcaatttggctctttaaccctctgcctatggttgtatccagtagaggaaat
gctgaatcagttttagctgtgcttgtgctttctgtattgtattatgtgcaaaagcgaagg
cttataaaaggagctttgatctatggactctctgttcatatgaagatttacccaataaca
tacatcctccctattgctttgttcttccaaaaagaagatttttatgggagccaagaagga
aaaagagttgtctcaaatttaaaatatatcagaatatttaggaatctattgcagagacta
ctttctcgtgacattctactatttgtaactgtgtcaggtgtgacttttgctttgctgaca
ctttttttttactacagatatggttgggaatttcttgaaaacacctacctctaccatctg
actaggagggatatacggcacaatttctctccatatttctacatgctttatttgactgct
gagaataataacagctttatcttgggccttgcagcattttttcctcaacttgtcttactt
tttgtggtgtctctagcctacttcaaagacctccctttctgctgcttcctccacactgca
atttttgtaagcttcaacaaagtatgcacctctcagtattttctctggtatctctgtctg
ctacctctggtgatgcctgggctgaagatgtccatgaccaatgggatatgccttataata
ttgtggttcttcagccaggcaatatggttggttcctgcttactttctggaatttgaaggc
caaaatacatttttatacatctggtgtgctggattgttatttttgcttattaacactgtc
attattgttcagatcatctcaaattatcagttacagagtaaaaagaccaagaaaacatag
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