Xenopus tropicalis (tropical clawed frog): 493483
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Entry
493483 CDS
T01011
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xtr03041
]
493483 (ythdc1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
493483 (ythdc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
493483
NCBI-ProteinID:
NP_001008121
Xenbase:
XB-GENE-1004178
UniProt:
F6PXU3
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All DBs
Position
1:complement(82571724..82600002)
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AA seq
673 aa
AA seq
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MEAERGEQSKEGEVNVLDDILTEAPDQDDELYNPESEQDVNEKKGSKRKSERIEMTENKR
QKQSSHMSRQPPQRVASGANKKVISTKGKPVTEYKCDDFHRQDRNRRSDGDRRIRSSSGT
ARDNYKGPQDKISIRKRESDRRPKSSTPDMASEKIRHEVSRRQSRSSHSSNEGNSDDYGS
ERETGSSESSDEEQGNNSENDEEGMEEEDEEEDEGEEAEEGEEEEEEYEQDEHARDQRDG
NDYDTRSEASDSESDSASFTDGDSVRSGSGSDISGSEKKHEKLPSSVRDVRKERTNKIRY
ILQEARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKFQ
GFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKCVHLTNPWNEHKP
VKIGRDGQEIEPDCGTQLCLLFPADDSIDLYQVIHKMRHKRRMHSQPRSRGRPSRREATR
EVGRRRPEEYDIHNRKKPRIDYPPEFHQRPGFVKDPRYQEVDRRFTGVRRDVFLNGSYND
YVREFHNMGPPPPWQGMPPYPAMEQAPHHPYYQHHAPPPQAHPQFSGHHPVQHDARYRDK
RVHDYDMRVDDFLRRTQAVVSGRRSRPRERERERERPRDNRRDRGRDRDRDRERERMRDR
ERGDRGDRGRYRR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcgaggggaacagagtaaagaaggtgaagtgaatgttttggatgatatt
ttaacggaagcgcccgatcaagatgatgaattatacaaccctgaaagtgaacaagatgtg
aatgagaaaaaaggttccaaacgaaaaagtgaaagaattgaaatgactgaaaataagaga
caaaagcagtcttcacatatgagcagacaacctcctcaaagagtagcatctggggctaac
aagaaggtaatcagcaccaaagggaaaccagttacagaatacaagtgtgatgactttcac
aggcaagacaggaacagaaggtcagatggggacagaagaatccgctcctcaagtggcacc
gcaagagacaattataaaggcccacaagataaaatcagcatcaggaagagagaatctgac
aggcgacctaaatccagtacaccggatatggcttctgagaaaataagacatgaagtaagc
agacgtcaaagcagatccagccattcttcaaatgaaggcaactctgatgattatggctct
gaaagggaaactggcagcagtgaatcatcagatgaagaacaaggcaataacagtgagaat
gatgaagaaggaatggaagaagaggatgaggaggaagatgagggggaggaagctgaagag
ggtgaagaagaggaggaagagtatgaacaagatgaacatgctcgagaccagagagatgga
aatgattatgatactcgtagtgaagcaagcgactctgaatcagactctgcctcttttact
gatggagattctgttagatctggttcaggatctgacatttcaggttcagaaaagaagcac
gaaaaattgccctcttctgttcgtgatgttcgaaaagaacgcaccaacaaaattagatac
attctgcaagaagctagattctttcttatcaagagtaacaaccatgagaatgtgtctttg
gccaaggcaaagggtgtttggtcaactttaccagttaatgaaaagaagttaaatgcagct
tttagatctgcaaggagtgttattctggtgttctcagttcgagagagtggaaaatttcaa
ggattcgctaggctgtcctctgagtcacatcatggtgggtcccctattcattgggtgctg
cctgctggaatgaatgcaaagatgcttggtggagtcttcaaaatagattggatttgcagg
agagaactaccattcactaaatgtgttcatctaaccaacccttggaatgaacataaacct
gtaaagattggacgagatggtcaggaaatagaacctgattgtggaacccagctctgcctt
ctattcccagcggatgattctattgacttgtatcaagtcattcataaaatgaggcataag
agacgaatgcattcacaacccagatcacgaggaagaccatctcgtcgtgaggcaacacga
gaagtgggaaggcgtcgaccagaagagtacgatattcataacagaaagaaaccaagaatt
gactatcctcctgagttccaccagcgcccaggttttgtcaaggatccacgttaccaagaa
gtagacagaagattcactggtgttcgaagagatgtatttttaaatgggtcttacaatgat
tatgtaagggaatttcataatatgggcccacctccaccatggcaaggaatgccaccgtat
ccggcaatggagcaggctcctcatcatccatactatcaacatcatgcaccgccacctcaa
gcacacccacagttctcaggtcatcatccggttcaacatgatgcaagatatcgggataaa
cgggttcatgattatgatatgagagtggatgatttccttcggcgaacgcaagctgtggtg
agcggaagaagaagccgacctagagagcgtgaaagagagcgggaacgtcccagagacaac
cgtcgagacaggggccgtgatcgtgatagagatcgtgagagagagaggatgcgtgatagg
gaaaggggggacagaggagataggggcagatacaggagataa
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