Xenopus tropicalis (tropical clawed frog): 493543
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Entry
493543 CDS
T01011
Symbol
csf1r
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor precursor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
493543 (csf1r)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
493543 (csf1r)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
493543 (csf1r)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xtr04090
]
493543 (csf1r)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
493543 (csf1r)
Protein kinases [BR:
xtr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
493543 (csf1r)
CD molecules [BR:
xtr04090
]
Proteins
493543 (csf1r)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR-1-like_Ig-like
V-set
Comm
C2-set_2
Motif
Other DBs
NCBI-GeneID:
493543
NCBI-ProteinID:
NP_001008181
Xenbase:
XB-GENE-6257851
UniProt:
Q640T5
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All DBs
Position
3:21274861..21316181
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AA seq
935 aa
AA seq
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MYPAVLALLVATIVYYGMATPVIKEGGEIIVSPGDRVTLTCSGNQTVKWDIRKSTKWIVK
QSETISVLEIKSATYKETKSYKCVYNDTRYSGMASVHLYVKDTSYSWSTFSGTVVKMEEG
KDVVLPCLITDPSIPRANIQLESSSLNSANISFDYHKGFTIHGVQMENDGMYICKATVNG
HVRKSLEMRLFVIEVPRLPPNVTMEPQNDIRIKGEAFKITCKATGKVLPVLRWETPATDY
TVTNTTRLTLMDWTTTSTLYIHKVNFTDSGNYTCIGYYPSYASQLKRISTSLHVIEEGYV
RLTTLGNNRITLRAGESTNITILIDAYPSQLSWAWIHENHGNQSNVSSQAVVKPDGHYRN
VTILQLNRILEYEEGSYTFTAQNARANASLAFKIVLNRPPVVNKMWSINNTYTCTASGYP
LPKIEWSKCSENKICHENIKQPMTNYNIIVESHLTVTQNITSIVCKAFNSVGEDSREMEL
PRTFETSRPDQEKLFTPIVISSLILAGIFIVLSAFLYYKYQQKPKYEIRWQIIQPAEGNN
YTCIDPTQLPYNDKWEFPRTNLQFGKTLGAGAFGKVMEATAVGLGNEDSAVTVAVKMLKP
SAHTDEVEALMSELKILSHLGNHKNIVNLLGACTHGGPILVITEYCHYGDLLNFLRKKAQ
IMNEMFSASLEEQSSTSSDYKNMTIEHKYIKSDSGFLSKGTDSYVEMKPVSSLSSQGDSL
IDEKDTDDMLPLDLYDLLSFSFQVSQGMSFLSAKNCIHRDVAARNVLVSHGRVVKICDFG
LARDIENDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEMFSLGRSPYPG
IMVNRKFYKMIKEGYKMDCPDYAPLEIYRIMKTCWDLEPTQRPTFNQISTLISKQINILN
NQDYANISEDQQVQECMENKRESQPHFKGNNYQFC
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtacccagcagtgctcgccctgctagtcgcaacaattgtctactatggcatggccacc
cctgtgattaaggagggaggagagataattgtcagtcctggggatcgcgttactcttacg
tgctcaggcaatcaaactgtaaaatgggacataaggaaatcaaccaaatggattgttaag
caatcggaaaccatttcagtgctggaaataaagtcagccacttataaggaaaccaaaagc
tacaagtgtgtttacaatgacacccggtattctggaatggcatcggtgcacttatatgtc
aaagacacaagctatagctggagcaccttctcaggcaccgtggttaaaatggaagaaggc
aaagatgtggttctaccctgcttgataacagatccatctatcccacgcgctaacattcag
ctggagtcctcctcattaaactcagccaacatatcatttgattatcataaaggctttact
attcatggggtgcagatggaaaatgatggaatgtatatctgtaaagccacagtgaatggc
catgtgagaaagtctctagaaatgaggctttttgtaattgaagtgccacggttacctccc
aatgttactatggaacctcaaaatgacattcgaataaaaggagaagcattcaaaatcacc
tgcaaagcaactggtaaagtgttacctgtactccgatgggaaacccctgcaacagattat
acagtcaccaatacaacaaggcttactctgatggactggactaccacttccaccttatat
atccataaagtgaacttcactgacagcgggaactacacatgcataggatactacccatca
tacgcatcacaactgaagagaatttctacgtctctgcatgtgatagaggaaggctatgta
cgcctcactacgttaggtaacaacaggataacgctaagagctggagaaagtaccaacata
acgatccttattgatgcatatccaagtcagttgtcctgggcttggatacatgagaaccat
ggaaaccaatcaaatgtgtcctcacaagcagtggtgaaaccggatgggcattacaggaat
gtgactatcttgcagctaaatcggatattggaatatgaagaaggctcctataccttcacc
gcacagaatgcaagagctaacgcctctttggctttcaaaatagtcttgaaccgcccacct
gtggttaataaaatgtggtcaattaataatacttatacttgcacagcatctggatatcca
ttacccaaaattgaatggtctaagtgttccgaaaataaaatttgccatgaaaatataaag
caacctatgacaaattataacattatagtagaaagtcatttaacagtcacgcagaacatc
acatccattgtctgcaaggcttttaactcggtaggagaggactctagggaaatggaatta
ccacggacatttgaaacgagccgtccagaccaggaaaaattatttacacctattgtgata
tcatctctgattctagcaggaatatttattgtgttgtcagccttcctgtattacaaatac
cagcagaaaccaaaatatgaaatccgctggcagatcattcagcctgcagaaggtaacaat
tacacatgcatcgacccaactcagctcccatacaatgataaatgggagtttccaaggacc
aacttgcaatttggaaagaccctgggagcaggagccttcgggaaggtgatggaagctact
gctgttggcctgggaaatgaagattcggcagtcacggtcgctgtgaagatgcttaaaccc
agtgcccatacagatgaggtggaagctttaatgtcagaactgaaaattctgagtcatctt
ggcaaccataagaatattgtcaacctgcttggcgcttgcacacatggaggcccgattctc
gtgatcacagagtactgtcactatggagacctgctgaacttcttgcggaagaaagcacaa
atcatgaatgaaatgtttagtgcatccctggaagaacagagcagtacatcaagcgattac
aaaaatatgactattgagcataagtatataaaaagtgacagtggcttcctaagcaagggc
acggacagttatgttgaaatgaaaccggtctcctctctctcaagtcaaggggattccctc
attgatgaaaaagatactgatgacatgttgcccttagacctttatgaccttctgagtttt
tcatttcaagtctcccaaggaatgtcctttttgtcagctaagaattgtattcaccgtgat
gttgctgccaggaatgtactggtgtcccacggacgtgttgtcaaaatctgtgactttggt
ttggccagggatatagagaatgattcaaattatgttgttaaaggcaatgctcgtctgcca
gtaaaatggatggcccctgagagcatattcgactgtgtctacacagtgcaaagtgatgtg
tggtcctatggaatccttctgtgggagatgttctcacttggcagaagtccctatcctggc
atcatggttaatcgcaagttttacaagatgatcaaagaagggtacaagatggactgccct
gattatgctccattggaaatatatcgcatcatgaagacttgttgggatctggagcccact
cagcgcccgacctttaaccagatcagcacactcatcagcaagcaaattaatatacttaac
aatcaggactatgccaacatctctgaggatcaacaagtccaggaatgcatggagaacaag
cgtgagagccagccgcactttaagggaaacaattatcagttttgttag
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